Evidence map›Paper›PMID 18824568›Full record

ArticleThe Journal of cell biology2008

Autonomy and robustness of translocation through the nuclear pore complex: a single-molecule study.

Thomas Dange, David Grünwald, Antje Grünwald, Reiner Peters, Ulrich Kubitscheck

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 94 citations in OpenAlex.

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  15. Time-resolved biophysical approaches to nucleocytoplasmic transport.Computational and structural biotechnology journal · 2017
    Review
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  20. Fisher information theory for parameter estimation in single molecule microscopy: tutorial.Journal of the Optical Society of America. A, Optics, image science, and vision · 2016
    Article

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Thomas DangeInstitute for Physical and Theoretical Chemistry, Rheinische Friedrich-Wilhelms-University Bonn, D-53115 Bonn, Germany.
David Grünwald
Antje Grünwald
Reiner Peters
Ulrich Kubitscheck
University of Bonn · DEUniversity of Münster · DE

Funding

Virtual Gating Machines for Protein PurificationR01GM071329 · NIGMS · ROCKEFELLER UNIVERSITY · PI ROUT, MICHAEL P · 2004 to 2013
$4.6M
NIGMS NIH HHS R01 GM071329NIGMS NIH HHS R01 GM071329-01
6 · The paper itself

Abstract

All molecular traffic between nucleus and cytoplasm occurs via the nuclear pore complex (NPC) within the nuclear envelope. In this study we analyzed the interactions of the nuclear transport receptors kapalpha2, kapbeta1, kapbeta1DeltaN44, and kapbeta2, and the model transport substrate, BSA-NLS, with NPCs to determine binding sites and kinetics using single-molecule microscopy in living cells. Recombinant transport receptors and BSA-NLS were fluorescently labeled by AlexaFluor 488, and microinjected into the cytoplasm of living HeLa cells expressing POM121-GFP as a nuclear pore marker. After bleaching the dominant GFP fluorescence the interactions of the microinjected molecules could be studied using video microscopy with a time resolution of 5 ms, achieving a colocalization precision of 30 nm. These measurements allowed defining the interaction sites with the NPCs with an unprecedented precision, and the comparison of the interaction kinetics with previous in vitro measurements revealed new insights into the translocation mechanism.

Indexed as

Active Transport, Cell Nucleusalpha Karyopherinsbeta KaryopherinsBinding SitesCell NucleusCytoskeletonGreen Fluorescent ProteinsHeLa CellsHumansKineticsMembrane GlycoproteinsMicroscopy, FluorescenceMutationNuclear EnvelopeNuclear Localization SignalsNuclear Porealpha Karyopherinsbeta KaryopherinsGreen Fluorescent Proteinskaryopherin alpha 2KPNB1 protein, humanMembrane GlycoproteinsNuclear Localization SignalsPOM121 protein, humanRecombinant Fusion ProteinsSerum Albumin, BovineTNPO1 protein, human

Identifiers

PMID18824568
PMCPMC2557044
OpenAlexW2117037202

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.