Evidence map›Paper›PMID 18824138›Full record

ArticleDNA repair2009

Role of budding yeast Rad18 in repair of HO-induced double-strand breaks.

Yukinori Hirano, Jayant Reddy, Katsunori Sugimoto

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yukinori HiranoDepartment of Cell Biology and Molecular Medicine, University of Medicine and Dentistry of New Jersey, New Jersey Medical School, Newark, NJ 07103, United States.
Jayant Reddy
Katsunori Sugimoto
Rutgers, The State University of New Jersey · US

Funding

PROFESSIONAL ONCOLOGY EDUCATION PROGRAMR25CA019536 · NCI · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI MAHON, GWENDOLYN MARIA, WHITEHEAD, IAN P · 1985 to 2014
$2.8M
Signaling network of Mec1 in DNA damage responseR01GM073876 · NIGMS · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI SUGIMOTO, KATSUNORI · 2005 to 2013
$2.7M
NCI NIH HHS R25 CA019536NIGMS NIH HHS R01 GM073876
6 · The paper itself

Abstract

The Rad6-Rad18 complex mono-ubiquitinates proliferating cell nuclear antigen (PCNA) at the lysine 164 residue after DNA damage and promotes DNA polymerase eta (Poleta)- and Polzeta/Rev1-dependent DNA synthesis. Double-strand breaks (DSBs) of DNA can be repaired by homologous recombination (HR) or non-homologous end-joining (NHEJ), both of which require new DNA synthesis. HO endonuclease introduces DSBs into specific DNA sequences. We have shown that Polzeta and Rev1 localize to HO-induced DSBs in a Mec1-dependent manner and promote Ku-dependent DSB repair. However, Polzeta and Rev1 localize to DSBs independently of PCNA ubiquitination. Here we provide evidence indicating that Rad18-mediated PCNA ubiquitination stimulates DNA synthesis by Polzeta and Rev1 in repair of HO-induced DSBs. Ubiquitination defective PCNA mutation or rad18Delta mutation confers the same DSB repair defect as rev1Delta mutation. Consistent with a role in DSB repair, Rad18 localizes to HO-induced DSBs in a Rad6-dependent manner. Unlike Polzeta or Rev1, Poleta is dispensable for repair of HO-induced DSBs. Ku and DNA ligase IV constitute a central NHEJ pathway. We also show that Polzeta and Rev1 act in the same pathway as DNA ligase IV, suggesting that Polzeta and Rev1 are involved in DNA synthesis during NHEJ. Our results suggest that Polzeta-Rev1 accumulates at regions near DSBs independently of PCNA ubiquitination and then interacts with ubiquitinated PCNA to facilitate DNA synthesis.

Indexed as

DNA Breaks, Double-StrandedDNA-Binding ProteinsDNA, FungalDNA Ligase ATPDNA LigasesDNA RepairEndodeoxyribonucleasesProliferating Cell Nuclear AntigenSaccharomyces cerevisiae ProteinsSaccharomycetalesDNA-Binding ProteinsDNA, FungalDNA Ligase ATPDNA LigasesDNL4 protein, S cerevisiaeEndodeoxyribonucleasesProliferating Cell Nuclear AntigenRAD18 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID18824138
PMCPMC2631570
OpenAlexW2158386344

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.