Evidence map›Paper›PMID 18822132›Full record

ArticleBMC neuroscience2008

Bioinformatic and statistical analysis of the optic nerve head in a primate model of ocular hypertension.

Kenneth S Kompass, Olga A Agapova, Wenjun Li, Paul L Kaufman, Carol A Rasmussen, M Rosario Hernandez

Open access · goldAbstract read
In one paragraph

Article in BMC neuroscience, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 55 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Decorin-An Antagonist of TGF-β in Astrocytes of the Optic Nerve.International journal of molecular sciences · 2021
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. T-Lymphocyte Subset Distribution and Activity in Patients With Glaucoma.Investigative ophthalmology & visual science · 2019
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. The complex role of neuroinflammation in glaucoma.Cold Spring Harbor perspectives in medicine · 2014
    Review
  19. Differential gene expression in glaucoma.Cold Spring Harbor perspectives in medicine · 2014
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Kenneth S KompassDepartment of Ophthalmology and Visual Sciences, Washington University School of Medicine, St, Louis, MO 63110, USA. kompass@vision.wustl.edu
Olga A Agapova
Wenjun Li
Paul L Kaufman
Carol A Rasmussen
M Rosario Hernandez
Northwestern University · USUniversity of Wisconsin–Madison · USWashington University in St. Louis · US

Funding

UW Vision Research Core - Administrative CoreP30EY016665 · NEI · UNIVERSITY OF WISCONSIN-MADISON · PI Donna M Peters · 2005 to 2026
$12.6M
GLAUCOMA: CONNECTIVE TISSUE CHANGES IN OPTIC NERVE HEADR01EY006416 · NEI · WASHINGTON UNIVERSITY · PI HERNANDEZ, M. ROSARIO · 1986 to 2008
$5.4M
ANTERIOR OCULAR SEGMENT PHYSIOLOGY AND PHARMACOLOGYR01EY002698 · NEI · UNIVERSITY OF WISCONSIN-MADISON · PI KAUFMAN, PAUL L · 1985 to 2009
$4.5M
NEI NIH HHS EY02698NEI NIH HHS EY-06416NEI NIH HHS P30 EY016665NEI NIH HHS R01 EY002698NEI NIH HHS R01 EY006416
6 · The paper itself

Abstract

backgroundThe nonhuman primate model of glaucomatous optic neuropathy most faithfully reproduces the human disease. We used high-density oligonucleotide arrays to investigate whole genome transcriptional changes occurring at the optic nerve head during primate experimental glaucoma.

resultsLaser scarification of the trabecular meshwork of cynomolgus macaques produced elevated intraocular pressure that was monitored over time and led to varying degrees of damage in different samples. The macaques were examined clinically before enucleation and the myelinated optic nerves were processed post-mortem to determine the degree of neuronal loss. Global gene expression was examined in dissected optic nerve heads with Affymetrix GeneChip microarrays. We validated a subset of differentially expressed genes using qRT-PCR, immunohistochemistry, and immuno-enriched astrocytes from healthy and glaucomatous human donors. These genes have previously defined roles in axonal outgrowth, immune response, cell motility, neuroprotection, and extracellular matrix remodeling.

conclusionOur findings show that glaucoma is associated with increased expression of genes that mediate axonal outgrowth, immune response, cell motility, neuroprotection, and ECM remodeling. These studies also reveal that, as glaucoma progresses, retinal ganglion cell axons may make a regenerative attempt to restore lost nerve cell contact.

Indexed as

AnimalsAstrocytesAxonsDisease Models, AnimalEyeGene Expression ProfilingGlaucomaGlial Fibrillary Acidic ProteinGPI-Linked ProteinsHumansImmunohistochemistryIntraocular PressureMacaca fascicularisMembrane GlycoproteinsNeuropeptidesOcular HypertensionGlial Fibrillary Acidic ProteinGPI-Linked ProteinsGPNMB protein, humanMembrane GlycoproteinsNeuropeptidesNRN1 protein, humanStathminSTMN1 protein, human

Identifiers

PMID18822132
PMCPMC2567987
OpenAlexW2107281122

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.