Evidence map›Paper›PMID 18821598›Full record

ArticleGenesis (New York, N.Y. : 2000)2008

Lentiviral integration preferences in transgenic mice.

Shang-Hsun Yang, Pei-Hsun Cheng, Robert T Sullivan, James W Thomas, Anthony W S Chan

Abstract read
In one paragraph

Article in Genesis (New York, N.Y. : 2000), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
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  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Shang-Hsun YangDivision of Neuroscience, Yerkes National Primate Research Center, Emory University, 954 Gatewood Road N.E., Atlanta, GA 30329, USA.
Pei-Hsun Cheng
Robert T Sullivan
James W Thomas
Anthony W S Chan

Funding

YNPRC NHP CLINICAL MEDICINE RESIDENCY PROGRAM - SUPPLEMENTP51RR000165 · NCRR · EMORY UNIVERSITY · PI ALTMAN, JOHN DAVID · 1985 to 2011
$114.0M
Establishment of a transgenic monkey of Huntingtons's dieseaseR24RR018827 · NCRR · EMORY UNIVERSITY · PI CHAN, ANTHONY WING SANG · 2004 to 2011
$6.2M
NCRR NIH HHS P51 RR000165NCRR NIH HHS R24 RR018827NCRR NIH HHS RR 00165NCRR NIH HHS RR 018827-04
6 · The paper itself

Abstract

Lentiviral gene transfer has a significant impact on the development of biomedical research. One of the most important features of lentiviruses is the capability to infect both dividing and nondividing cells. However, little is known whether integration preference exists, specifically in early embryos. An in-depth genome analysis on 112 independent lentiviral integration sites from 43 transgenic founder mice was performed to determine if there are preferable sites for lentiviral integration in early embryonic genome. Our results demonstrated that lentiviruses were biased in integrating within intragenic regions, especially in the introns. However, no integration preference was found associated with specific chromosomes, repetitive elements, or CpG islands, nor was there any preference for integrating at close proximity to transcription start sites. Our findings suggested that lentiviruses were biased to integrate into the intragenic regions of early embryonic genome of mouse.

Indexed as

AnimalsFemaleGenomeLentivirusMiceMice, Inbred ICRMice, TransgenicRepetitive Sequences, Nucleic AcidTranscription Initiation SiteTransgenesTranslocation, GeneticVirus Integration

Identifiers

PMID18821598
PMCPMC4381762

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.