Evidence map›Paper›PMID 18820942›Full record

ReviewHistochemistry and cell biology2008

Use of Bodipy-labeled sphingolipid and cholesterol analogs to examine membrane microdomains in cells.

David L Marks, Robert Bittman, Richard E Pagano

Open access · hybridAbstract readReview
In one paragraph

Review in Histochemistry and cell biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 130 citations in OpenAlex.

  1. Article
  2. Article
  3. Synthetic Lipid Biology.Chemical reviews · 2025
    Review
  4. Atlas ofeLife · 2023
    Article
  5. Article
  6. Atlas ofbioRxiv : the preprint server for biology · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Synthesis and Biological Evaluation of BODIPY-PF-543.Molecules (Basel, Switzerland) · 2019
    Article
  18. Nanoscale dynamics of cholesterol in the cell membrane.The Journal of biological chemistry · 2019
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

David L MarksThoracic Diseases Research Unit, Department of Medicine, Mayo Clinic College of Medicine, Stabile 8, 200 First Street, SW, Rochester, MN 55905-0001, USA.
Robert Bittman
Richard E Pagano
Mayo Clinic · USQueens College, CUNY · US

Funding

INTRACELLULAR TRANSLOCATION AND METABOLISM OF LIPIDSR01GM022942 · NIGMS · MAYO CLINIC ROCHESTER · PI MARKS, DAVID LARRY · 1985 to 2010
$5.3M
MEMBRANE TRAFFIC IN SPHINGOLIPID STORAGE DISEASESR01GM060934 · NIGMS · MAYO CLINIC ROCHESTER · PI LIMPER, ANDREW H · 2001 to 2011
$2.9M
Synthesis of Novel Bioactive Sphingolipids as a ResourceR24HL083187 · NHLBI · QUEENS COLLEGE · PI BITTMAN, ROBERT · 2006 to 2013
$2.5M
NHLBI NIH HHS HL-083187NHLBI NIH HHS R24 HL083187NIGMS NIH HHS GM-2242NIGMS NIH HHS GM-60934NIGMS NIH HHS R01 GM022942NIGMS NIH HHS R01 GM060934
6 · The paper itself

Abstract

Much evidence has accumulated to show that cellular membranes such as the plasma membrane, contain multiple "microdomains" of differing lipid and protein composition and function. These domains are sometimes enriched in cholesterol and sphingolipids and are believed to be important structures for the regulation of many biological and pathological processes. This review focuses on the use of fluorescent (Bodipy) labeled analogs of sphingolipids and cholesterol to study such domains. We discuss the similarities between the behavior of Bodipy-cholesterol and natural cholesterol in artificial bilayers and in cultured cells, and the use of Bodipy-sphingolipid analogs to visualize membrane domains in living cells based on the concentration-dependent monomer-excimer fluorescence properties of the Bodipy-fluorophore. The use of Bodipy-D-erythro-lactosylceramide is highlighted for detection of domains on the plasma membrane and endosome membranes, and the importance of the sphingolipid stereochemistry in modulating domain formation is discussed. Finally, we suggest that Bodipy-sphingolipids may be useful in future studies to examine the relationship between membrane domains at the cell surface and domains enriched in other lipids and proteins on the inner leaflet of the plasma membrane.

Indexed as

AnimalsBoron CompoundsCholesterolFluorescent DyesHumansImage Processing, Computer-AssistedIntracellular MembranesMembrane MicrodomainsMembranes, ArtificialMicroscopy, FluorescenceSphingolipids4,4-difluoro-4-bora-3a,4a-diaza-s-indaceneBoron CompoundsCholesterolFluorescent DyesMembranes, ArtificialSphingolipids

Identifiers

PMID18820942
PMCPMC3922293
OpenAlexW2102985843

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.