Evidence map›Paper›PMID 18820078›Full record

ArticleEukaryotic cell2009

Biofilm formation by Pneumocystis spp.

Melanie T Cushion, Margaret S Collins, Michael J Linke

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 96 citations in OpenAlex.

  1. Immune Responses toJournal of inflammation research · 2026
    Review
  2. mBio · 2024
    Article
  3. Retracing the evolution ofMicrobiology and molecular biology reviews : MMBR · 2024
    Review
  4. Article
  5. Extracellular vesicles fromMicrobiology spectrum · 2024
    Article
  6. Article
  7. Axenic Long-Term Cultivation ofJournal of fungi (Basel, Switzerland) · 2023
    Article
  8. Review
  9. Genetic Mouse Models of Pneumocystis Pneumonia.Methods in molecular biology (Clifton, N.J.) · 2023
    Review
  10. Research progress of the biosynthetic strains and pathways of bacterial cellulose.Journal of industrial microbiology & biotechnology · 2022
    Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Melanie T CushionUniversity of Cincinnati College of Medicine, 231 Albert Sabin Way, ML 560, Cincinnati, OH 45267-0560, USA. Melanie.Cushion@uc.edu
Margaret S Collins
Michael J Linke
Sabin Vaccine Institute · USCincinnati VA Medical Center · US

Funding

New Approaches for Development of PcP TherapyR01AI050450 · NIAID · UNIVERSITY OF CINCINNATI · PI CUSHION, MELANIE T · 2002 to 2006
$1.7M
Biofilm Formation by PneumocystisR01AI076104 · NIAID · UNIVERSITY OF CINCINNATI · PI CUSHION, MELANIE T · 2008 to 2011
$1.5M
NIAID NIH HHS R01 AI050450NIAID NIH HHS R01AI050450NIAID NIH HHS R01 AI076104NIAID NIH HHS R01AI076104
6 · The paper itself

Abstract

Pneumocystis spp. can cause a lethal pneumonia in hosts with debilitated immune systems. The manner in which these fungal infections spread throughout the lung, the life cycles of the organisms, and their strategies used for survival within the mammalian host are largely unknown, due in part to the lack of a continuous cultivation method. Biofilm formation is one strategy used by microbes for protection against environmental assaults, for communication and differentiation, and as foci for dissemination. We posited that the attachment and growth of Pneumocystis within the lung alveoli is akin to biofilm formation. An in vitro system comprised of insert wells suspended in multiwell plates containing supplemented RPMI 1640 medium supported biofilm formation by P. carinii (from rat) and P. murina (from mouse). Dramatic morphological changes accompanied the transition to a biofilm. Cyst and trophic forms became highly refractile and produced branching formations that anastomosed into large macroscopic clusters that spread across the insert. Confocal microscopy revealed stacking of viable organisms enmeshed in concanavalin A-staining extracellular matrix. Biofilms matured over a 3-week time period and could be passaged. These passaged organisms were able to cause infection in immunosuppressed rodents. Biofilm formation was inhibited by farnesol, a quorum-sensing molecule in Candida spp., suggesting that a similar communication system may be operational in the Pneumocystis biofilms. Intense staining with a monoclonal antibody to the major surface glycoproteins and an increase in (1,3)-beta-D-glucan content suggest that these components contributed to the refractile properties. Identification of this biofilm process provides a tractable in vitro system that should fundamentally advance the study of Pneumocystis.

Indexed as

Animalsbeta-GlucansBiofilmsFarnesolHumansImmunocompromised HostPneumocystisPneumocystis InfectionsPulmonary AlveoliRatsRats, Sprague-Dawleybeta-GlucansFarnesol

Identifiers

PMID18820078
PMCPMC2643605
OpenAlexW2108287805

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.