Evidence map›Paper›PMID 18818952›Full record

ArticleMolecular genetics and genomics : MGG2008

Molecular and genetic characterization of the S locus in Hordeum bulbosum L., a wild self-incompatible species related to cultivated barley.

Katsuyuki Kakeda, Toshiro Ibuki, Junko Suzuki, Hidetaka Tadano, Yuko Kurita, Yosuke Hanai, Yasuo Kowyama

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Article in Molecular genetics and genomics : MGG, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Review
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  6. Article
  7. Article
  8. High Resolution Mapping of aFrontiers in plant science · 2020
    Article
  9. Article
  10. Article
  11. Article
  12. Overcoming self-incompatibility in grasses: a pathway to hybrid breeding.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016
    Review
  13. Article
  14. Review
  15. Review
  16. Self-incompatibility.F1000 biology reports · 2010
    Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Katsuyuki KakedaGraduate School of Bioresources, Mie University, Tsu, 514-8507, Japan. kakeda@bio.mie-u.ac.jp
Toshiro Ibuki
Junko Suzuki
Hidetaka Tadano
Yuko Kurita
Yosuke Hanai
Yasuo Kowyama
Mie University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gametophytic self-incompatibility (GSI) in the grasses is controlled by a distinct two-locus genetic system governed by the multiallelic loci S and Z. We have employed diploid Hordeum bulbosum as a model species for identifying the self-incompatibility (SI) genes and for elucidating the molecular mechanisms of the two-locus SI system in the grasses. In this study, we attempted to identify S haplotype-specific cDNAs expressed in pistils and anthers at the flowering stage in H. bulbosum, using the AFLP-based mRNA fingerprinting (AMF, also called cDNA-AFLP) technique. We used the AMF-derived DNA clones as markers for fine mapping of the S locus, and found that the locus resided in a chromosomal region displaying remarkable suppression of recombination, encompassing a large physical region. Furthermore, we identified three AMF-derived markers displaying complete linkage to the S locus, although they showed no significant homology with genes of known functions. Two of these markers showed expression patterns that were specific to the reproductive organs (pistil or anther), suggesting that they could be potential candidates for the S gene.

Indexed as

AgricultureGenes, PlantAmplified Fragment Length Polymorphism AnalysisGene Expression Regulation, PlantGenetic LinkageGenetic MarkersHaplotypesHordeumMolecular Sequence DataPhysical Chromosome MappingPlant ProteinsRecombination, GeneticRNA, MessengerGenetic MarkersPlant ProteinsRNA, Messenger

Identifiers

PMID18818952
OpenAlexW2075622707

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.