Evidence map›Paper›PMID 18818859›Full record

ArticleJournal of molecular evolution2008

Intraspecific concerted evolution of the rDNA ITS1 in Anopheles farauti sensu stricto (Diptera: Culicidae) reveals recent patterns of population structure.

James E Bower, Mark Dowton, Robert D Cooper, Nigel W Beebe

Abstract read
In one paragraph

Article in Journal of molecular evolution, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
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  3. Development of a Multiplex Real-Time PCR to DisambiguateCurrent issues in molecular biology · 2024
    Article
  4. Morphological and phylogenetic analysis ofSaudi journal of biological sciences · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

James E BowerBiological Sciences, University of Wollongong, Northfields Avenue, Wollongong, NSW 2522, Australia.
Mark Dowton
Robert D Cooper
Nigel W Beebe

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We examined the intraindividual variation present in the first ribosomal internal transcribed spacer (ITS1) of Anopheles farauti to determine the level of divergence among populations for this important malarial vector. We isolated 187 clones from 70 individuals and found regional variation among four internal tandem repeats. The data were partitioned prior to analysis given the presence of a paralogous ITS2 sequence, called the 5'-subrepeat, inserted in the ITS1 of most clones. A high level of homogenization and population differentiation was observed for this repeat, which indicates a higher rate of turnover relative to the adjacent 'core' region. Bayesian analysis was performed using several substitutional models on both a combined and a partitioned data set. On the whole, the ITS1 phylogeny and geographic origin of the samples appear to be congruent. Some interesting exceptions indicate the spread of variant repeats between populations and the retention of ancestral polymorphism. Our data clearly demonstrate concerted evolution at the intraspecific level despite intraindividual variation and a complex internal repeat structure from a species that occupies a continuous coastal distribution. A high rate of genomic turnover in combination with a high level of sequence divergence appears to be a major factor leading to its concerted evolution within these populations.

Indexed as

Evolution, MolecularAnimalsAnophelesBase CompositionBayes TheoremClone CellsDNA, Ribosomal SpacerGeographyPhylogenyPopulation DynamicsRepetitive Sequences, Nucleic AcidSequence AlignmentSequence Analysis, DNASpecies SpecificityDNA, Ribosomal Spacer

Identifiers

PMID18818859
PMCPMC9931795

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.