Evidence map›Paper›PMID 18818727›Full record

ArticlePLoS computational biology2008

A dual receptor crosstalk model of G-protein-coupled signal transduction.

Patrick Flaherty, Mala L Radhakrishnan, Tuan Dinh, Robert A Rebres, Tamara I Roach, Michael I Jordan, Adam P Arkin

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
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  4. RTK signaling requires C3ar1/C5ar1 and IL-6R joint signaling to repress dominant PTEN, SOCS1/3 and PHLPP restraint.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
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  9. Sequential staining improves detection of CCR2 and CX3CR1 on monocytes when simultaneously evaluating CCR5 by multicolor flow cytometry.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2013
    Article
  10. Profile of Michael I. Jordan.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  11. Article
  12. The cellular building blocks of breathing.Comprehensive Physiology · 2012
    Review
  13. A novel cost function to estimate parameters of oscillatory biochemical systems.EURASIP journal on bioinformatics & systems biology · 2012
    Article
  14. Article
  15. Complement in the brain.Molecular immunology · 2011
    Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Patrick FlahertyDepartment of Electrical Engineering and Computer Sciences, University of California Berkeley, Berkeley, California, United States of America.
Mala L Radhakrishnan
Tuan Dinh
Robert A Rebres
Tamara I Roach
Michael I Jordan
Adam P Arkin
University of California, Berkeley · USNorthern California Institute for Research and Education · USLawrence Berkeley National Laboratory · USMassachusetts Institute of Technology · US

Funding

MICROFABRICATED DYNAMIC ARRY CYTOMETER FOR CELL SIGNALINU54GM062114 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI GRAY, MARTHA L · 2000 to 2007
$63.7M
Howard Hughes Medical InstituteNIGMS NIH HHS GM62114NIGMS NIH HHS U54 GM062114NIGMS NIH HHS U54 GM62114
6 · The paper itself

Abstract

Macrophage cells that are stimulated by two different ligands that bind to G-protein-coupled receptors (GPCRs) usually respond as if the stimulus effects are additive, but for a minority of ligand combinations the response is synergistic. The G-protein-coupled receptor system integrates signaling cues from the environment to actuate cell morphology, gene expression, ion homeostasis, and other physiological states. We analyze the effects of the two signaling molecules complement factors 5a (C5a) and uridine diphosphate (UDP) on the intracellular second messenger calcium to elucidate the principles that govern the processing of multiple signals by GPCRs. We have developed a formal hypothesis, in the form of a kinetic model, for the mechanism of action of this GPCR signal transduction system using data obtained from RAW264.7 macrophage cells. Bayesian statistical methods are employed to represent uncertainty in both data and model parameters and formally tie the model to experimental data. When the model is also used as a tool in the design of experiments, it predicts a synergistic region in the calcium peak height dose response that results when cells are simultaneously stimulated by C5a and UDP. An analysis of the model reveals a potential mechanism for crosstalk between the Galphai-coupled C5a receptor and the Galphaq-coupled UDP receptor signaling systems that results in synergistic calcium release.

Indexed as

Models, BiologicalAnimalsCalcium SignalingCell LineComplement C5aComputational BiologyFeedback, PhysiologicalGTP-Binding Protein alpha Subunits, Gi-GoGTP-Binding Protein alpha Subunits, Gq-G11LigandsMacrophagesMiceReceptor Cross-TalkReceptors, G-Protein-CoupledRNA InterferenceSignal TransductionComplement C5aGTP-Binding Protein alpha Subunits, Gi-GoGTP-Binding Protein alpha Subunits, Gq-G11LigandsReceptors, G-Protein-CoupledUridine Diphosphate

Identifiers

PMID18818727
PMCPMC2528964
OpenAlexW2012696487

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.