Evidence map›Paper›PMID 18818659›Full record

ArticleNeuropsychopharmacology : official publication of the American College of Neuropsychopharmacology2009

GABRG1 and GABRA2 as independent predictors for alcoholism in two populations.

Mary-Anne Enoch, Colin A Hodgkinson, Qiaoping Yuan, Bernard Albaugh, Matti Virkkunen, David Goldman

Open access · bronzeAbstract read
In one paragraph

Article in Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 1 synthesis or guideline pooled it, 97 citations in OpenAlex.

  1. Association of gamma-aminobutyric acid A receptor α2 gene (GABRA2) with alcohol use disorder.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2014
    Pooled it
  2. Trial
  3. Trial
  4. Article
  5. Article
  6. Article
  7. Human genetics and epigenetics of alcohol use disorder.The Journal of clinical investigation · 2024
    Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Genetic influences on conduct disorder.Neuroscience and biobehavioral reviews · 2018
    Review
  13. GABAPsychopharmacology · 2018
    Review
  14. Article
  15. Article
  16. Review
  17. Molecular pharmacology · 2017
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Mary-Anne EnochLaboratory of Neurogenetics, National Institute on Alcohol Abuse and Alcoholism, National Institutes of Health, Bethesda, MD 20892, USA. maenoch@dicbr.niaaa.nih.gov
Colin A Hodgkinson
Qiaoping Yuan
Bernard Albaugh
Matti Virkkunen
David Goldman
National Institute on Alcohol Abuse and Alcoholism · USNational Institutes of Health · USUniversity of Helsinki · FIWeatherford (United States) · US

Funding

Integrative genetics of behavior with high throughput technologiesZIAAA000301 · NIAAA · NATIONAL INSTITUTE ON ALCOHOL ABUSE AND ALCOHOLISM · PI GOLDMAN, DAVID · 2009 to 2025
$68.6M
Genetic influences on alcohol use disorder in Native AmericansZIAAA000281 · NIAAA · NATIONAL INSTITUTE ON ALCOHOL ABUSE AND ALCOHOLISM · PI GOLDMAN, DAVID · 2009 to 2025
$6.7M
Haplotype-Based Analyses for Alcoholism and AnxietyZ01AA000305 · NIAAA · NATIONAL INSTITUTE ON ALCOHOL ABUSE AND ALCOHOLISM · PI GOLDMAN, DAVID · 2004 to 2008
$318k
Intramural NIH HHS Z01 AA000305Intramural NIH HHS Z99 AA999999
6 · The paper itself

Abstract

The chromosome 4 cluster of GABA(A) receptor genes is predominantly expressed in the brain reward circuitry and this chromosomal region has been implicated in linkage scans for alcoholism. Variation in one chromosome 4 gene, GABRA2, has been robustly associated with alcohol use disorders (AUD) although no functional locus has been identified. As HapMap data reveal moderate long-distance linkage disequilibrium across GABRA2 and the adjacent gene, GABRG1, it is possible that the functional locus is in GABRG1. We genotyped 24 SNPs across GABRG1 and GABRA2 in two population isolates: 547 Finnish Caucasian men (266 alcoholics) and 311 community-derived Plains Indian men and women (181 alcoholics). In both the Plains Indians and the Caucasians: (1) the GABRG1 haplotype block(s) did not extend to GABRA2; (2) GABRG1 haplotypes and SNPs were significantly associated with AUD; (3) there was no association between GABRA2 haplotypes and AUD; (4) there were several common (>or=0.05) haplotypes that spanned GABRG1 and GABRA2 (341 kb), three of which were present in both populations: one of these ancestral haplotypes was associated with AUD, the other two were more common in non-alcoholics; this association was determined by GABRG1; (5) in the Finns, three less common (<0.05) extended haplotypes showed an association with AUD that was determined by GABRA2. Our results suggest that there are likely to be independent, complex contributions from both GABRG1 and GABRA2 to alcoholism vulnerability.

Indexed as

AdultAlcoholismFemaleFinlandGene FrequencyGenetic Predisposition to DiseaseHaplotypesHumansIndians, North AmericanLinkage DisequilibriumMaleOklahomaPolymorphism, Single NucleotideReceptors, GABA-ASequence Analysis, DNAWhite PeopleGABRA2 protein, humanGABRG1 protein, humanReceptors, GABA-A

Identifiers

PMID18818659
PMCPMC2656604
OpenAlexW2051758054

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.