Evidence map›Paper›PMID 18818197›Full record

ArticleThe Journal of biological chemistry2008

Characterization of active site structure in CYP121. A cytochrome P450 essential for viability of Mycobacterium tuberculosis H37Rv.

Kirsty J McLean, Paul Carroll, D Geraint Lewis, Adrian J Dunford, Harriet E Seward, Rajasekhar Neeli, Myles R Cheesman, Laurent Marsollier, Philip Douglas, W Ewen Smith and 5 more

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed.

  1. Azole chroman-4-one, tetralone and chromen-4-one derivatives: synthesis, Mycobacterium tuberculosis CYP121A1 enzyme inhibition and antimycobacterial activity.Medicinal chemistry research : an international journal for rapid communications on design and mechanisms of action of biologically active agents · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Insights into Active Site Cysteine Residues inInternational journal of molecular sciences · 2025
    Review
  6. Structure-Function Analysis of the EssentialInternational journal of molecular sciences · 2024
    Article
  7. Article
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  14. Activation modes in biocatalytic radical cyclization reactions.Journal of industrial microbiology & biotechnology · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Kirsty J McLeanManchester Interdisciplinary Biocentre, Faculty of Life Sciences, University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom. Kirsty.McLean@Manchester.ac.uk
Paul Carroll
D Geraint Lewis
Adrian J Dunford
Harriet E Seward
Rajasekhar Neeli
Myles R Cheesman
Laurent Marsollier
Philip Douglas
W Ewen Smith
Ida Rosenkrands
Stewart T Cole
David Leys
Tanya Parish
Andrew W Munro

Funding

Biotechnology and Biological Sciences Research Council BBS/B/06288/2Biotechnology and Biological Sciences Research Council C19757/2
6 · The paper itself

Abstract

Mycobacterium tuberculosis (Mtb) cytochrome P450 gene CYP121 is shown to be essential for viability of the bacterium in vitro by gene knock-out with complementation. Production of CYP121 protein in Mtb cells is demonstrated. Minimum inhibitory concentration values for azole drugs against Mtb H37Rv were determined, the rank order of which correlated well with Kd values for their binding to CYP121. Solution-state spectroscopic, kinetic, and thermodynamic studies and crystal structure determination for a series of CYP121 active site mutants provide further insights into structure and biophysical features of the enzyme. Pro346 was shown to control heme cofactor conformation, whereas Arg386 is a critical determinant of heme potential, with an unprecedented 280-mV increase in heme iron redox potential in a R386L mutant. A homologous Mtb redox partner system was reconstituted and transported electrons faster to CYP121 R386L than to wild type CYP121. Heme potential was not perturbed in a F338H mutant, suggesting that a proposed P450 superfamily-wide role for the phylogenetically conserved phenylalanine in heme thermodynamic regulation is unlikely. Collectively, data point to an important cellular role for CYP121 and highlight its potential as a novel Mtb drug target.

Indexed as

Antitubercular AgentsAzolesBacterial ProteinsCatalytic DomainCoenzymesCrystallography, X-RayCytochrome P-450 Enzyme InhibitorsCytochrome P-450 Enzyme SystemDrug Resistance, BacterialGenetic Complementation TestHemeIronMutationMycobacterium tuberculosisOxidation-ReductionThermodynamicsAntitubercular AgentsAzolesBacterial ProteinsCoenzymescytochrome P-450 CYP121Cytochrome P-450 Enzyme InhibitorsCytochrome P-450 Enzyme SystemHemeIron

Identifiers

PMID18818197
PMCPMC2662266

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.