Evidence map›Paper›PMID 18818082›Full record

ArticleCurrent biology : CB2008

3' UTRs are the primary regulators of gene expression in the C. elegans germline.

Christopher Merritt, Dominique Rasoloson, Darae Ko, Geraldine Seydoux

Open access · bronzeAbstract read
In one paragraph

Article in Current biology : CB, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 258 papers.

0numbers the graph read from it
0cells of the map it votes in
258citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

258 citing papers in PubMed, 413 citations in OpenAlex.

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  11. A gene expression atlas of a juvenile nervous system.bioRxiv : the preprint server for biology · 2025
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  12. RNA (New York, N.Y.) · 2025
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  15. Intraspecific variation in the duration of epigenetic inheritance.bioRxiv : the preprint server for biology · 2025
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  17. Notch controls APC/CScience advances · 2025
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  19. Article
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198 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Christopher MerrittDepartment of Molecular Biology and Genetics, Howard Hughes Medical Institute, Center for Cell Dynamics, Johns Hopkins School of Medicine, Baltimore, Maryland 21205, USA.
Dominique Rasoloson
Darae Ko
Geraldine Seydoux
Howard Hughes Medical Institute · US

Funding

REGULATION OF GERM CELL FATE DURING EMBRYOGENESISR01HD037047 · NICHD · JOHNS HOPKINS UNIVERSITY · PI GERALDINE Catherine Joelle SEYDOUX · 1999 to 2026
$4.3M
MULTIDISCIPLINARY TRAINING IN THE REPRODUCTIVE SCIENCEST32HD007276 · NICHD · JOHNS HOPKINS UNIVERSITY · PI ZIRKIN, BARRY R · 1985 to 2011
$1.5M
Howard Hughes Medical InstituteNICHD NIH HHS 2T32HD007276NICHD NIH HHS R01 HD037047NICHD NIH HHS R01HD37047NICHD NIH HHS T32 HD007276
6 · The paper itself

Abstract

How genes are regulated to produce the correct assortment of proteins for every cell type is a fundamental question in biology. For many genes, regulation begins at the DNA level with the use of promoter sequences to control transcription. Regulation can also occur after transcription using sequences in the 3' untranslated region (UTR) of the mRNA to affect mRNA stability and/or translation [1]. The C. elegans gonad is an excellent tissue to study gene regulation during development: In the adult, germ cells are arranged in order of differentiation, with undifferentiated progenitors at one end of the gonad, cells in meiotic prophase in the middle, and gametes at the other end [2]. Using a transgenic assay, we have compared the contribution of promoters and 3' UTRs to gene regulation during germline development. We find that for most genes tested, 3' UTRs are sufficient for regulation. With the exception of promoters activated during spermatogenesis, promoters are permissive for expression in all germ cell types (from progenitors to oocytes and sperm). In progenitors, 3' UTRs inhibit the production of meiotic and oocyte proteins by posttranscriptional mechanisms involving PUF- and KH-domain RNA-binding proteins. Our findings indicate that many genes rely primarily on 3' UTRs, not promoters, for regulation during germline development.

Indexed as

Gene Expression Regulation, Developmental3' Untranslated RegionsAnimalsCaenorhabditis elegansGerm CellsMalePromoter Regions, GeneticRNA-Binding ProteinsRNA, MessengerRNA Processing, Post-TranscriptionalSpermatogenesisSpermatozoa3' Untranslated RegionsRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID18818082
PMCPMC2585380
OpenAlexW2087895896

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.