Evidence map›Paper›PMID 18817431›Full record

ArticleThe journal of physical chemistry. B2008

Visualization of long human telomere mimics by single-molecule fluorescence imaging.

Andrea K Pomerantz, W E Moerner, Eric T Kool

Abstract readLetter
In one paragraph

Article in The journal of physical chemistry. B, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Assessing Protein Dynamics on Low-Complexity Single-Stranded DNA Curtains.Langmuir : the ACS journal of surfaces and colloids · 2018
    Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Andrea K Pomerantz
W E Moerner
Eric T Kool

Funding

Single-Molecule Fluorophores for Cellular Imaging(RMI)P20HG003638 · NHGRI · STANFORD UNIVERSITY · PI MOERNER, WILLIAM E · 2004 to 2008
$3.0M
CHEMICAL AND BIOLOGICAL MIMICRY OF TELOMERASER01GM069763 · NIGMS · STANFORD UNIVERSITY · PI KOOL, ERIC T. · 2004 to 2007
$1.1M
NHGRI NIH HHS P20 HG003638NIGMS NIH HHS GM003638NIGMS NIH HHS GM069763NIGMS NIH HHS R01 GM069763
6 · The paper itself

Abstract

Study of long single-stranded telomeric DNA is important for a variety of basic science and biotechnological applications, yet few methods exist for synthesis and visualization of single copies of this DNA in solution at biologically relevant length scales necessary for assessment of heterogeneity in its structure and behavior. We have synthesized kilobase-long single-stranded human telomere mimics in situ by rolling circle replication (RCR) on a microscope coverslip surface and visualized individual strands by staining with SYBR Gold. Under buffer flow, differential extensibility and varying morphology of these long telomere-mimicking DNA sequences were observed at the single-molecule level in real time. Using this procedure, we detected striking differences in the extensibility of individual RCR products based on the human G-rich telomeric sequence in the presence and absence of short, complementary single-stranded oligonucleotides. We also apply this new mode of single-stranded DNA characterization to probe the interaction of kilobase-length telomere mimics with the small-molecule G-quadruplex-binding agent TMPyP4.

Indexed as

FluorescenceBase SequenceBiomimetic MaterialsDNA, Single-StrandedHumansTelomereDNA, Single-Stranded

Identifiers

PMID18817431
PMCPMC2688642

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.