Evidence map›Paper›PMID 18816437›Full record

ArticleHepatology (Baltimore, Md.)2008

Interpretation of positive transcription-mediated amplification test results from polymerase chain reaction-negative samples obtained after treatment of chronic hepatitis C.

Chihiro Morishima, Timothy R Morgan, James E Everhart, Elizabeth C Wright, Minjun C Apodaca, David R Gretch, Mitchell L Shiffman, Gregory T Everson, Karen L Lindsay, William M Lee and 5 more

Abstract read
In one paragraph

Article in Hepatology (Baltimore, Md.), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Guideline
  2. Trial
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Chihiro MorishimaDepartment of Laboratory Medicine, Virology Division, University of Washington, Seattle, WA, USA.
Timothy R Morgan
James E Everhart
Elizabeth C Wright
Minjun C Apodaca
David R Gretch
Mitchell L Shiffman
Gregory T Everson
Karen L Lindsay
William M Lee
Anna S F Lok
Jules L Dienstag
Marc G Ghany
Teresa M Curto
HALT-C Trial Group

Funding

ZOPOLRESTAT IN NORMOTENSIVE, TYPE 1 DIA WITH INCIPIENT NEPHROPATHYM01RR000043 · NCRR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ZAIA, JOHN A · 1985 to 2010
$76.4M
ZOVIRAX CREAM TO TREAT HERPES LABIALIS IN ADOLESCENTSM01RR000827 · NCRR · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHANG, R JEFFREY · 1985 to 2010
$74.3M
ZOPOLRESTAT PHARMACOKINETICS IN DIABETICS WITH VARYING RENAL FUNCTIONM01RR000051 · NCRR · UNIVERSITY OF COLORADO DENVER · PI KOSMISKI, LISA A. · 1985 to 2008
$52.6M
ZINC GLUCONATE GLYCINE LOZENGES &VITAMIN C EFFECTS ON COMMON COLDM01RR000042 · NCRR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RUBENFIRE, MELVYN · 1985 to 2007
$40.8M
ZD6416 Analgesic--Painful Distal Symmetrical PolyneuropaM01RR001066 · NCRR · MASSACHUSETTS GENERAL HOSPITAL · PI BROWN, EMERY N · 1985 to 2008
$37.4M
X-LINKED HYPOPHOSPHATEMIAM01RR000065 · NCRR · VIRGINIA COMMONWEALTH UNIVERSITY · PI SANYAL, ARUN J · 1985 to 2010
$24.8M
ZONISAMIDE VERSUS PLACEBOM01RR006192 · NCRR · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI DRAZINIC, CAROLYN M · 1994 to 2008
$22.1M
XU 40468 IN HYPERCHOLESTEROLEMIAM01RR000633 · NCRR · UT SOUTHWESTERN MEDICAL CENTER · PI TOTO, ROBERT DANIEL · 1985 to 2007
$21.0M
Natural History, Therapy and Pathogenesis of Chronic Viral Hepatitis CZIADK075009 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI GHANY, MARC · 2009 to 2025
$7.2M
HEPATITIS C CLINICAL TRIAL-DATA COORDINATING CENTER-267092328N01DK092328 · NIDDK · NEW ENGLAND RESEARCH INSTITUTES, INC. · 1999 to 2004
$1.5M
HEPATITIS C CLINICAL TRIAL-CLINICAL CENTERSN01DK092326 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BONKOVSKY, HERBERT L · 1999 to 2000
$872k
HEPATITIS C CLINICAL TRIAL- CLINICAL CENTERSN01DK092322 · NIDDK · VIRGINIA COMMONWEALTH UNIVERSITY · PI SHIFFMAN, MITCHELL L · 1999 to 2000
$699k
NCRR NIH HHS M01 RR000042NCRR NIH HHS M01 RR000043NCRR NIH HHS M01 RR000051NCRR NIH HHS M01 RR000065NCRR NIH HHS M01RR-00042NCRR NIH HHS M01RR-00043NCRR NIH HHS M01RR-00051NCRR NIH HHS M01 RR000633NCRR NIH HHS M01RR-00065NCRR NIH HHS M01 RR000827NCRR NIH HHS M01 RR001066NCRR NIH HHS M01 RR006192NCRR NIH HHS M01RR-00633NCRR NIH HHS M01RR-00827NCRR NIH HHS M01RR-01066NCRR NIH HHS M01RR-06192NIDDK NIH HHS N01 DK092318NIDDK NIH HHS N01 DK092319NIDDK NIH HHS N01 DK092320NIDDK NIH HHS N01 DK092321NIDDK NIH HHS N01 DK092322NIDDK NIH HHS N01 DK092323NIDDK NIH HHS N01 DK092324NIDDK NIH HHS N01 DK092325NIDDK NIH HHS N01 DK092326NIDDK NIH HHS N01 DK092327NIDDK NIH HHS N01 DK092328NIDDK NIH HHS N01-DK-9-2318NIDDK NIH HHS N01-DK-9-2319NIDDK NIH HHS N01-DK-9-2320NIDDK NIH HHS N01-DK-9-2321NIDDK NIH HHS N01-DK-9-2322NIDDK NIH HHS N01-DK-9-2323NIDDK NIH HHS N01-DK-9-2324NIDDK NIH HHS N01-DK-9-2325NIDDK NIH HHS N01-DK-9-2326NIDDK NIH HHS N01-DK-9-2327NIDDK NIH HHS N01-DK-9-2328
6 · The paper itself

Abstract

unlabelledThe Siemens VERSANT transcription-mediated amplification (TMA) assay is extremely sensitive for the detection of hepatitis C virus (HCV) RNA in serum. Eleven of 180 subjects in the Hepatitis C Antiviral Long-term Treatment against Cirrhosis (HALT-C) Trial who achieved polymerase chain reaction (PCR)-defined sustained virological response (SVR) at week 72 also had TMA-positive results from the same blood draw; six were positive on repeat testing. We report the follow-up on these 11 patients, and the reproducibility of TMA test results from PCR-negative samples in relationship to antiviral treatment outcome. Peginterferon and ribavirin treatment was initiated in 1145 prior interferon nonresponders with advanced hepatic fibrosis. Treatment was continued for 48 weeks if patients had undetectable HCV RNA by PCR at treatment week 20. Frozen serum samples from weeks 12, 20, 24, 48, and 72 were subsequently tested by TMA. Nine of the 11 patients returned for testing (median, 30 months after the week 72 visit), and all had undetectable HCV RNA by TMA and PCR. Among 759 PCR-negative samples obtained during treatment that were tested twice by TMA, 17% overall exhibited consistently positive results, and 21% exhibited inconsistently positive results. SVR was more likely if TMA was consistently negative than if consistently or inconsistently positive. With continued treatment, patients with inconsistently positive TMA results were more likely to become TMA-negative than TMA-positive (P < 0.0001).

conclusionIn PCR-negative samples, positive TMA results may indicate the presence of low levels of HCV RNA. However, because patients with positive TMA results may achieve SVR, management decisions during therapy should not be based on a single positive TMA test result.

Indexed as

Gene AmplificationTranscription, GeneticAntiviral AgentsHepacivirusHepatitis C, ChronicHumansInterferon-alphaInterferon alpha-2Liver CirrhosisPolyethylene GlycolsPolymerase Chain ReactionRecombinant ProteinsReproducibility of ResultsRNA, ViralViral LoadAntiviral AgentsInterferon-alphaInterferon alpha-2peginterferon alfa-2aPolyethylene GlycolsRecombinant ProteinsRNA, Viral

Identifiers

PMID18816437
PMCPMC2804270

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.