Evidence map›Paper›PMID 18812512›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

Directed evolution of a G protein-coupled receptor for expression, stability, and binding selectivity.

Casim A Sarkar, Igor Dodevski, Manca Kenig, Stefan Dudli, Anja Mohr, Emmanuel Hermans, Andreas Plückthun

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 103 papers.

0numbers the graph read from it
0cells of the map it votes in
103citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

103 citing papers in PubMed, 197 citations in OpenAlex.

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  12. Annealing synchronizes the 70Proceedings of the National Academy of Sciences of the United States of America · 2022
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  13. Crystal structure of the αNature communications · 2022
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  14. Review
  15. State-Targeting Stabilization of Adenosine AInternational journal of molecular sciences · 2021
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  16. Optimizing the Expression of Human Dopamine Receptors inInternational journal of molecular sciences · 2021
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  20. Article

43 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Casim A SarkarBiochemisches Institut, Universität Zürich, Winterthurerstrasse 190, CH-8057 Zürich, Switzerland.
Igor Dodevski
Manca Kenig
Stefan Dudli
Anja Mohr
Emmanuel Hermans
Andreas Plückthun
University of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We outline a powerful method for the directed evolution of integral membrane proteins in the inner membrane of Escherichia coli. For a mammalian G protein-coupled receptor, we arrived at a sequence with an order-of-magnitude increase in functional expression that still retains the biochemical properties of wild type. This mutant also shows enhanced heterologous expression in eukaryotes (12-fold in Pichia pastoris and 3-fold in HEK293T cells) and greater stability when solubilized and purified, indicating that the biophysical properties of the protein had been under the pressure of selection. These improvements arise from multiple small contributions, which would be difficult to assemble by rational design. In a second screen, we rapidly pinpointed a single amino acid substitution in wild type that abolishes antagonist binding while retaining agonist-binding affinity. These approaches may alleviate existing bottlenecks in structural studies of these targets by providing sufficient quantities of stable variants in defined conformational states.

Indexed as

AnimalsCell LineCloning, MolecularDirected Molecular EvolutionEscherichia coliHumansIntracellular MembranesMutationPichiaProtein EngineeringRatsReceptors, G-Protein-CoupledReceptors, NeurotensinSelection, Geneticneurotensin type 1 receptorReceptors, G-Protein-CoupledReceptors, Neurotensin

Identifiers

PMID18812512
PMCPMC2567449
OpenAlexW2105128791

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.