Evidence map›Paper›PMID 18810495›Full record

ArticleMolecular genetics and genomics : MGG2008

KT/HAK/KUP potassium transporters gene family and their whole-life cycle expression profile in rice (Oryza sativa).

Madhur Gupta, Xuhua Qiu, Lei Wang, Weibo Xie, Chengjun Zhang, Lizhong Xiong, Xingming Lian, Qifa Zhang

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In one paragraph

Article in Molecular genetics and genomics : MGG, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 142 citations in OpenAlex.

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  2. Review
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  9. The Sweet Potato KPlants (Basel, Switzerland) · 2023
    Article
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  16. Article
  17. Characterization of HAK protein family inFrontiers in plant science · 2022
    Article
  18. Article
  19. Frontiers in plant science · 2022
    Article
  20. Functional genomic analysis of KFrontiers in plant science · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Madhur GuptaNational Key Laboratory of Crop Genetic Improvement, National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan, 430070, China.
Xuhua Qiu
Lei Wang
Weibo Xie
Chengjun Zhang
Lizhong Xiong
Xingming Lian
Qifa Zhang
Huazhong Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

KT/HAK/KUP potassium transporter protein-encoding genes constitute a large family in the plant kingdom. The KT/HAK/KUP family is important for various physiological processes of plant life. In this study, we identified 27 potential KT/HAK/KUP family genes in rice (Oryza sativa) by database searching. Analysis of these KT/HAK/KUP family members identified three conserved motifs with unknown functions, and 11-15 trans-membrane segments, most of which are conserved. A total of 144 putative cis-elements were found in the 2 kb upstream region of these genes, of which a Ca2+-responsive cis-element, two light-responsive cis-elements, and a circadian-regulated cis-element were identified in the majority of the members, suggesting regulation of these genes by these signals. A comprehensive expression analysis of these genes was performed using data from microarrays hybridized with RNA samples of 27 tissues covering the entire life cycle from three rice genotypes, Minghui 63, Zhenshan 97, and Shanyou 63. We identified preferential expression of two OsHAK genes in stamen at 1 day before flowering compared with all the other tissues. OsHAK genes were also found to be differentially upregulated or downregulated in rice seedlings subjected to treatments with three hormones. These results would be very useful for elucidating the roles of these genes in growth, development, and stress response of the rice plant.

Indexed as

Gene Expression ProfilingGene Expression Regulation, DevelopmentalAmino Acid SequenceCation Transport ProteinsGene Expression Regulation, PlantGenes, PlantHormonesMolecular Sequence DataMultigene FamilyOligonucleotide Array Sequence AnalysisOryzaPhylogenyPlant ProteinsPotassiumResponse ElementsRNA, PlantCation Transport ProteinsHormonesPlant ProteinsPotassiumRNA, Plant

Identifiers

PMID18810495
OpenAlexW2072681680

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.