Evidence map›Paper›PMID 18808325›Full record

ArticleStem cells and development2009

A conserved role for Hox paralog group 4 in regulation of hematopoietic progenitors.

Michelina Iacovino, Carmen Hernandez, Zhaohui Xu, Gagan Bajwa, Melissa Prather, Michael Kyba

Open access · greenAbstract read
In one paragraph

Article in Stem cells and development, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 64 citations in OpenAlex.

  1. Review
  2. Article
  3. Diversification and Functional Evolution of HOX Proteins.Frontiers in cell and developmental biology · 2022
    Review
  4. Review
  5. Review
  6. Transforming activities of theHaematologica · 2020
    Article
  7. Article
  8. Single cell transcriptome dynamics from pluripotency to FLK1Development (Cambridge, England) · 2019
    Article
  9. Article
  10. Stem cells and development · 2019
    Article
  11. Article
  12. Article
  13. Article
  14. Long non-coding RNAs in the regulation of myeloid cells.Journal of hematology & oncology · 2016
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Michelina IacovinoDepartment of Pediatrics and Lillehei Heart Institute, University of Minnesota, 312 Church St. SE, Minneapolis, MN 55455, USA.
Carmen Hernandez
Zhaohui Xu
Gagan Bajwa
Melissa Prather
Michael Kyba
Southwestern Medical CenterThe University of Texas Southwestern Medical Center · US

Funding

Probing the Hematopoietic Hox CodeR01HL081186 · NHLBI · UT SOUTHWESTERN MEDICAL CENTER · PI KYBA, MICHAEL · 2007 to 2011
$2.1M
NHLBI NIH HHS 1R01 HL 081186-01NHLBI NIH HHS R01 HL081186
6 · The paper itself

Abstract

Regulatory circuits that control stem cell fate decisions can be identified and understood by manipulating individual regulatory elements genetically. While impractical in the rare somatic stem cells of primary tissue, this approach is feasible in embryonic stem cells differentiated in vitro into the somatic stem cell type of interest. We present an improved highly efficient targeting system allowing genes to be integrated into a predetermined, doxycycline-inducible locus, and corresponding inducible embryonic stem cell lines to be generated rapidly. We apply this system to evaluate a key hematopoietic progenitor cell regulatory element, HoxB4, and its mammalian paralogs, whose effects have not yet been tested in this context. We show that all Hox paralog group 4 members, A4, B4, C4, and D4, have similar effects on hematopoietic stem and progenitor self-renewal in vitro, and thus classify Hox paralog group 4 as promoting self-renewal. Each paralog group 4 member both promotes proliferation and inhibits differentiation, enabling the exponential expansion of hematopoietic progenitors from the c-kit(+)/CD41(+) cell fraction of day 6 murine embryoid bodies. By evaluating a set of deletion mutants we show that sequences in addition to the homeodomain and hexapeptide motif are required for this activity. These results highlight the utility of this expression system to perform functional and structural analyses of genetic regulators of cell fate decisions.

Indexed as

Conserved SequenceAmino Acid SequenceAnimalsCell DifferentiationCell ProliferationEmbryo, MammalianGene DeletionGene Expression RegulationGene Expression Regulation, DevelopmentalGene TargetingHematopoietic Stem CellsHomeodomain ProteinsMiceMolecular Sequence DataMultipotent Stem CellsProtein Structure, TertiaryHomeodomain ProteinsHoxb4 protein, mouseTranscription Factors

Identifiers

PMID18808325
PMCPMC2775089
OpenAlexW2053425969

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.