Evidence map›Paper›PMID 18797192›Full record

ArticleAutophagy2008

Molecular basis of the regulation of Beclin 1-dependent autophagy by the gamma-herpesvirus 68 Bcl-2 homolog M11.

Sangita Sinha, Christopher L Colbert, Nils Becker, Yongjie Wei, Beth Levine

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Autophagy, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 109 papers.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed
7.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed, 157 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. BECN1Autophagy · 2023
    Article
  8. Article
  9. Roles of NADInternational journal of molecular sciences · 2022
    Review
  10. Article
  11. Article
  12. Review
  13. Virus, Exosome, and MicroRNA: New Insights into Autophagy.Advances in experimental medicine and biology · 2022
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Binding ofAutophagy · 2020
    Article

49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sangita SinhaDepartment of Internal Medicine, University of Texas Southwestern Medical Center, Dallas, Texas 75390-9113, USA. sangita.sinha@utsouthwestern.edu
Christopher L Colbert
Nils Becker
Yongjie Wei
Beth Levine
The University of Texas Southwestern Medical Center · US

Funding

ANALYSIS OF BECLIN 1 IN AUTOPHAGY AND TUMOR SUPPRESSIONR01CA084254 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI LEVINE, BETH C · 2000 to 2009
$3.5M
Beclin 1-Bcl-2 Interactions: Effects on AutophagyR01CA109618 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI LEVINE, BETH C · 2004 to 2014
$3.1M
Molecular mechanism by which gamma-herpesviruses evade autophagyR21AI078108 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI SINHA, SANGITA · 2008 to 2009
$415k
Effects of MBSR in Early Stage Breast Cancer RecoveryR21CA109168 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI LENGACHER, CECILE A · 2006 to 2007
$299k
Howard Hughes Medical InstituteNCI NIH HHS R01 CA084254NCI NIH HHS R01 CA109168NCI NIH HHS R01 CA109618NCI NIH HHS R21 CA109168NIAID NIH HHS R21 AI078108
6 · The paper itself

Abstract

Gamma-herpesviruses (gammaHVs), including important human pathogens such as Epstein Barr virus, Kaposi's sarcoma-associated HV, and the murine gammaHV68, encode homologs of the antiapoptotic, cellular Bcl-2 (cBcl-2) to promote viral replication and pathogenesis. The precise molecular details by which these proteins function in viral infection are poorly understood. Autophagy, a lysosomal degradation pathway, is inhibited by the interaction of cBcl-2s with a key autophagy effector, Beclin 1, and can also be inhibited by gammaHV Bcl-2s. Here we investigate the gammaHV68 M11-Beclin 1 interaction in atomic detail, using biochemical and structural approaches. We show that the Beclin 1 BH3 domain is the primary determinant of binding to M11 and other Bcl-2s, and this domain binds in a hydrophobic groove on M11, reminiscent of the binding of different BH3 domains to other Bcl-2s. Unexpectedly, regions outside of, but contiguous with, the Beclin 1 BH3 domain also contribute to this interaction. We find that M11 binds to Beclin 1 more strongly than do KSHV Bcl-2 or cBcl-2. Further, the differential affinity of M11 for different BH3 domains is caused by subtle, yet significant, variations in the atomic details of each interaction. Consistent with our structural analysis, we find that Beclin 1 residues L116 and F123, and M11 residue pairs G86 + R87 and Y60 + L74, are required for M11 to bind to Beclin 1 and downregulate autophagy. Thus, our results suggest that M11 inhibits autophagy through a mechanism that involves the binding of the Beclin 1 BH3 domain in the M11 hydrophobic surface groove.

Indexed as

AutophagyAmino Acid SequenceAnimalsApoptosis Regulatory ProteinsBeclin-1Chlorocebus aethiopsCOS CellsHumansImmunoprecipitationMembrane ProteinsMiceMutationProtein Interaction MappingProtein Structure, TertiaryProto-Oncogene Proteins c-bcl-2RhadinovirusApoptosis Regulatory ProteinsBeclin-1BECN1 protein, humanM3 protein, Murine gammaherpesvirusMembrane ProteinsProto-Oncogene Proteins c-bcl-2Viral Proteins

Identifiers

PMID18797192
PMCPMC2755179
OpenAlexW2126897634

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.