Evidence map›Paper›PMID 18794843›Full record

ArticleNature structural & molecular biology2008

Activation of tyrosine kinases by mutation of the gatekeeper threonine.

Mohammad Azam, Markus A Seeliger, Nathanael S Gray, John Kuriyan, George Q Daley

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 225 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
225citing papers in PubMed, 1 pooled it
14.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

225 citing papers in PubMed, 1 synthesis or guideline pooled it, 414 citations in OpenAlex.

  1. Pooled it
  2. Tyrosine kinases sample unique activation ensembles.bioRxiv : the preprint server for biology · 2026
    Article
  3. Review
  4. Article
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  8. Review
  9. Article
  10. Article
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  12. Article
  13. Exploring the conformational landscape of protein kinases.Current opinion in structural biology · 2024
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

165 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Mohammad AzamKarp research building, 7th floor, Division of Pediatric Hematology/Oncology, Children's Hospital of Boston, Massachusetts 02115, USA.
Markus A Seeliger
Nathanael S Gray
John Kuriyan
George Q Daley
University of California, Berkeley · USBoston Children's Hospital · USDana-Farber Cancer Institute · USMCPHS University · US

Funding

NIH Director's Pioneer Award (RMI)DP1OD000256 · OD · CHILDREN'S HOSPITAL BOSTON · PI DALEY, GEORGE Q · 2004 to 2008
$4.2M
Design of inhibitors of drug-resistance protein kinasesR01CA130876 · NCI · DANA-FARBER CANCER INST · PI GRAY, NATHANAEL SCHIANDER · 2008 to 2012
$2.1M
Therapeutic Mechanisms in Chronic Myelogenous LeukemiaR01CA086991 · NCI · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI DALEY, GEORGE Q · 2001 to 2005
$1.5M
Conformational Dynamics of Protein Tyrosine Kinases Src and AblK99GM080097 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI SEELIGER, MARKUS A · 2007 to 2008
$160k
Howard Hughes Medical InstituteNCI NIH HHS R01 CA086991NCI NIH HHS R01 CA130876NIGMS NIH HHS K99GM08009NIGMS NIH HHS K99 GM080097NIH HHS DP1 OD000256
6 · The paper itself

Abstract

Protein kinases targeted by small-molecule inhibitors develop resistance through mutation of the 'gatekeeper' threonine residue of the active site. Here we show that the gatekeeper mutation in the cellular forms of c-ABL, c-SRC, platelet-derived growth factor receptor-alpha and -beta, and epidermal growth factor receptor activates the kinase and promotes malignant transformation of BaF3 cells. Structural analysis reveals that a network of hydrophobic interactions-the hydrophobic spine-characteristic of the active kinase conformation is stabilized by the gatekeeper substitution. Substitution of glycine for the residues constituting the spine disrupts the hydrophobic connectivity and inactivates the kinase. Furthermore, a small-molecule inhibitor that maximizes complementarity with the dismantled spine (compound 14) inhibits the gatekeeper mutation of BCR-ABL-T315I. These results demonstrate that mutation of the gatekeeper threonine is a common mechanism of activation for tyrosine kinases and provide structural insights to guide the development of next-generation inhibitors.

Indexed as

Binding SitesCell LineCrystallography, X-RayCSK Tyrosine-Protein KinaseEnzyme ActivationErbB ReceptorsHumansHydrophobic and Hydrophilic InteractionsModels, MolecularMutationProtein Structure, TertiaryProtein-Tyrosine KinasesProto-Oncogene Proteins c-ablReceptors, Platelet-Derived Growth Factorsrc-Family KinasesThreonineCSK protein, humanCSK Tyrosine-Protein KinaseErbB ReceptorsProtein-Tyrosine KinasesProto-Oncogene Proteins c-ablReceptors, Platelet-Derived Growth Factorsrc-Family KinasesThreonine

Identifiers

PMID18794843
PMCPMC2575426
OpenAlexW2043789128

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.