Evidence map›Paper›PMID 18794370›Full record

ArticleMolecular and cellular biology2008

Stb1 collaborates with other regulators to modulate the G1-specific transcriptional circuit.

Robertus A M de Bruin, Tatyana I Kalashnikova, Curt Wittenberg

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 39 citations in OpenAlex.

  1. Experimental evolution of cellular miniaturization reveals a putative mechanism for cell size evolution.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  4. Budding yeast relies on GScience advances · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Robertus A M de BruinDepartment of Molecular Biology, MB-3 The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.
Tatyana I Kalashnikova
Curt Wittenberg
Scripps Research Institute · US

Funding

REGULATION OF G1-SPECIFIC GENE EXPRESSION IN YEASTR01GM059441 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI WITTENBERG, CURT · 2000 to 2016
$6.9M
NIGMS NIH HHS GM059441NIGMS NIH HHS R01 GM059441
6 · The paper itself

Abstract

G(1)-specific transcription in the budding yeast Saccharomyces cerevisiae depends upon SBF and MBF. Whereas inactivation of SBF-regulated genes during the G(1)/S transition depends upon mitotic B-type cyclins, inactivation of MBF has been reported to involve multiple regulators, Nrm1 and Stb1. Nrm1 is a transcriptional corepressor that inactivates MBF-regulated transcription via negative feedback as cells exit G(1) phase. Cln/cyclin-dependent kinase (CDK)-dependent inactivation of Stb1, identified via its interaction with the histone deacetylase (HDAC) component Sin3, has also been reported to inactivate MBF-regulated transcription. This report shows that Stb1 is a stable component of both SBF and MBF that binds G(1)-specific promoters via Swi6 during G(1) phase. It is important for the growth of cells in which SBF or MBF is inactive. Although dissociation of Stb1 from promoters as cells exit G(1) correlates with Stb1 phosphorylation, phosphorylation is only partially dependent upon Cln1/2 and is not involved in transcription inactivation. Inactivation depends upon Nrm1 and Clb/CDK activity. Stb1 inactivation dampens maximal transcriptional induction during late G(1) phase and also derepresses gene expression in G(1)-phase cells prior to Cln3-dependent transcriptional activation. The repression during G(1) also depends upon Sin3. We speculate that the interaction between Stb1 and Sin3 regulates the Sin3/HDAC complex at G(1)-specific promoters.

Indexed as

Gene Expression Regulation, FungalTranscription, GeneticCyclin-Dependent KinasesCyclinsG1 PhaseHistone DeacetylasesPromoter Regions, GeneticRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsCLN1 protein, S cerevisiaeCLN2 protein, S cerevisiaeCyclin-Dependent KinasesCyclinsHistone DeacetylasesMBP1 protein, S cerevisiaeNrm1 protein, S cerevisiaeRepressor ProteinsSaccharomyces cerevisiae ProteinsSBF protein, S cerevisiaeSIN3 protein, S cerevisiaeSTB1 protein, S cerevisiaeSWI6 protein, S cerevisiaeTranscription Factors

Identifiers

PMID18794370
PMCPMC2573305
OpenAlexW2123985810

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.