ArticleGenetics2008
Cross-species bacterial artificial chromosome-fluorescence in situ hybridization painting of the tomato and potato chromosome 6 reveals undescribed chromosomal rearrangements.
Article in Genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.
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Who cites it
36 citing papers in PubMed.
- Thriving or Withering? Plant Molecular Cytogenetics in the First Quarter of the 21st Century.International journal of molecular sciences · 2025Review
- Dissecting the Meiotic Recombination Patterns in aInternational journal of molecular sciences · 2023Article
- Mapping of the gene in tomato conferring resistance to root-knot nematodes at high soil temperature.Frontiers in plant science · 2023Article
- Repetitive Sequence Barcode Probe for Karyotype Analysis inInternational journal of molecular sciences · 2022Article
- Development and applications of a collection of single copy gene-based cytogenetic DNA markers in garden asparagus.Frontiers in plant science · 2022Article
- Chromosome Painting Provides Insights Into the Genome Structure and Evolution of Sugarcane.Frontiers in plant science · 2021Article
- Identification of Chromosomes and Chromosome Rearrangements in Crop Brassicas andFrontiers in plant science · 2020Article
- Meiotic crossovers characterized by haplotype-specific chromosome painting in maize.Nature communications · 2019Article
- Fluorescence in situ hybridization in plants: recent developments and future applications.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2019Review
- The Cdk1/Cdk2 homolog CDKA;1 controls the recombination landscape inProceedings of the National Academy of Sciences of the United States of America · 2019Article
- Comparative analysis of repetitive sequences among species from the potato and the tomato clades.Annals of botany · 2019Article
- Comparative Oligo-FISH Mapping: An Efficient and Powerful Methodology To Reveal Karyotypic and Chromosomal Evolution.Genetics · 2018Article
- Cytogenetic maps of homoeologous chromosomes AComparative cytogenetics · 2017Article
- Molecular, genetic and evolutionary analysis of a paracentric inversion in Arabidopsis thaliana.The Plant journal : for cell and molecular biology · 2016Article
- Detection of an inversion in the Ty-2 region between S. lycopersicum and S. habrochaites by a combination of de novo genome assembly and BAC cloning.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015Article
- Linkage disequilibrium network analysis (LDna) gives a global view of chromosomal inversions, local adaptation and geographic structure.Molecular ecology resources · 2015Article
- Construction of cytogenetic map of Gossypium herbaceum chromosome 1 and its integration with genetic maps.Molecular cytogenetics · 2015Article
- Genomic rearrangements and signatures of breeding in the allo-octoploid strawberry as revealed through an allele dose based SSR linkage map.BMC plant biology · 2014Article
- Insight into the karyotype evolution of brachypodium species using comparative chromosome barcoding.PloS one · 2014Article
- Mapping nonrecombining regions in barley using multicolor FISH.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2013Article
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14 authors.
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Abstract
Ongoing genomics projects of tomato (Solanum lycopersicum) and potato (S. tuberosum) are providing unique tools for comparative mapping studies in Solanaceae. At the chromosomal level, bacterial artificial chromosomes (BACs) can be positioned on pachytene complements by fluorescence in situ hybridization (FISH) on homeologous chromosomes of related species. Here we present results of such a cross-species multicolor cytogenetic mapping of tomato BACs on potato chromosomes 6 and vice versa. The experiments were performed under low hybridization stringency, while blocking with Cot-100 was essential in suppressing excessive hybridization of repeat signals in both within-species FISH and cross-species FISH of tomato BACs. In the short arm we detected a large paracentric inversion that covers the whole euchromatin part with breakpoints close to the telomeric heterochromatin and at the border of the short arm pericentromere. The long arm BACs revealed no deviation in the colinearity between tomato and potato. Further comparison between tomato cultivars Cherry VFNT and Heinz 1706 revealed colinearity of the tested tomato BACs, whereas one of the six potato clones (RH98-856-18) showed minor putative rearrangements within the inversion. Our results present cross-species multicolor BAC-FISH as a unique tool for comparative genetic studies across Solanum species.
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