Evidence map›Paper›PMID 18791221›Full record

ArticleGenetics2008

A genomewide survey argues that every zygotic gene product is dispensable for the initiation of somatic homolog pairing in Drosophila.

Jack R Bateman, C-ting Wu

Abstract read
In one paragraph

Article in Genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Genomic strategies for drug repurposing.Journal of the Egyptian National Cancer Institute · 2024
    Review
  4. Modeling homologous chromosome recognition via nonspecific interactions.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Pairing and anti-pairing: a balancing act in the diploid genome.Current opinion in genetics & development · 2016
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jack R BatemanDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA. jbateman@bowdoin.edu
C-ting Wu

Funding

A STUDY OF TRANSVECTION AT THE DROSOPHILA YELLOW GENER01GM061936 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WU, CHAO-TING · 2000 to 2003
$1.7M
Studies of enhancer action in trans in DrosophilaF32GM067460 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI BATEMAN, JACK · 2003 to 2005
$139k
NIGMS NIH HHS F32 GM067460NIGMS NIH HHS GM067460NIGMS NIH HHS R01 GM061936NIGMS NIH HHS R01GM61936
6 · The paper itself

Abstract

Studies from diverse organisms show that distinct interchromosomal interactions are associated with many developmental events. Despite recent advances in uncovering such phenomena, our understanding of how interchromosomal interactions are initiated and regulated is incomplete. During the maternal-to-zygotic transition (MZT) of Drosophila embryogenesis, stable interchromosomal contacts form between maternal and paternal homologous chromosomes, a phenomenon known as somatic homolog pairing. To better understand the events that initiate pairing, we performed a genomewide assessment of the zygotic contribution to this process. Specifically, we took advantage of the segregational properties of compound chromosomes to generate embryos lacking entire chromosome arms and, thus, all zygotic gene products derived from those arms. Using DNA fluorescence in situ hybridization (FISH) to assess the initiation of pairing at five separate loci, this approach allowed us to survey the entire zygotic genome using just a handful of crosses. Remarkably, we found no defect in pairing in embryos lacking any chromosome arm, indicating that no zygotic gene product is essential for pairing to initiate. From these data, we conclude that the initiation of pairing can occur independently of zygotic control and may therefore be part of the developmental program encoded by the maternal genome.

Indexed as

Chromosome PairingAnimalsDrosophila melanogasterEmbryo, NonmammalianFemaleGenes, InsectGenome, InsectIn Situ Hybridization, FluorescenceMaleRecombination, GeneticTranscriptional ActivationZygote

Identifiers

PMID18791221
PMCPMC2581938

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.