Evidence map›Paper›PMID 18791162›Full record

ArticleBlood2009

In vivo genetic mutations define predominant functions of the human T-cell leukemia/lymphoma virus p12I protein.

Risaku Fukumoto, Vibeke Andresen, Izabela Bialuk, Valentina Cecchinato, Jean-Claude Walser, Valerio W Valeri, Julie M Nauroth, Antoine Gessain, Christophe Nicot, Genoveffa Franchini

Abstract read
In one paragraph

Article in Blood, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Complete Rescue of HTLV-1Pathogens (Basel, Switzerland) · 2024
    Article
  6. Tunneling Nanotubes: The Cables for Viral Spread and Beyond.Results and problems in cell differentiation · 2024
    Review
  7. Intercellular Transport of Viral Proteins.Results and problems in cell differentiation · 2024
    Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Risaku FukumotoAnimal Models and Retroviral Vaccines Section, National Cancer Institute, Bethesda, MD, USA.
Vibeke Andresen
Izabela Bialuk
Valentina Cecchinato
Jean-Claude Walser
Valerio W Valeri
Julie M Nauroth
Antoine Gessain
Christophe Nicot
Genoveffa Franchini
National Cancer Institute · USInstitut Pasteur · FRNational Institute of Diabetes and Digestive and Kidney Diseases · USUniversity of Kansas Medical Center · US

Funding

T-CELL TRANSFORMATION BY ONCOVIRUSESZ01BC005645 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI FRANCHINI, GENOVEFFA · 1996 to 2008
$2.3M
Uncoupling of Jak/STAT in HTLV-1 associated leukemiaR01CA115398 · NCI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI NICOT, CHRISTOPHE P · 2007 to 2011
$1.3M
Intramural NIH HHSNCI NIH HHS R01 CA115398
6 · The paper itself

Abstract

The human T-cell leukemia/lymphoma virus type 1 (HTLV-1) ORF-I encodes a 99-amino acid hydrophobic membrane protein, p12(I), that affects receptors in different cellular compartments. We report here that proteolytic cleavage dictates different cellular localization and functions of p12(I). The removal of a noncanonical endoplasmic reticulum (ER) retention/retrieval signal within the amino terminus of p12(I) is necessary for trafficking to the Golgi apparatus and generation of a completely cleaved 8-kDa protein. The 8-kDa protein in turn traffics to the cell surface, is recruited to the immunologic synapse following T-cell receptor (TCR) ligation, and down-regulates TCR proximal signaling. The uncleaved 12-kDa form of p12(I) resides in the ER and interacts with the beta and gamma(c) chains of the interleukin-2 receptor (IL-2R), the heavy chain of the major histocompatibility complex (MHC) class I, as well as calreticulin and calnexin. Genetic analysis of ORF-I from ex vivo samples of HTLV-1-infected patients reveals predominant amino acid substitutions within ORF-I that affect proteolytic cleavage, suggesting that ER-associated functions of p12(I) may contribute to the survival and proliferation of the infected T cells in the host.

Indexed as

MutationAnimalsCalnexinCalreticulinCell ProliferationCell SurvivalChlorocebus aethiopsCOS CellsGolgi ApparatusHeLa CellsHistocompatibility Antigens Class IHTLV-I InfectionsHumansHuman T-lymphotropic virus 1Hydrophobic and Hydrophilic InteractionsImmunological SynapsesCalnexinCalreticulinHistocompatibility Antigens Class IIL2RB protein, humanIL2RG protein, humanInterleukin-2 Receptor beta SubunitInterleukin Receptor Common gamma SubunitMembrane Proteinsp12I protein, Human T-lymphotropic virus 1Protein Sorting SignalsReceptors, Antigen, T-CellViral Regulatory and Accessory Proteins

Identifiers

PMID18791162
PMCPMC2670790
OpenAlexW2024639690

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.