Evidence map›Paper›PMID 18787898›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2008

Quantitative trait locus analysis for hemostasis and thrombosis.

Qila Sa, Erika Hart, Annie E Hill, Joseph H Nadeau, Jane L Hoover-Plow

Abstract read
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Mouse chromosome 17 candidate modifier genes for thrombosis.Mammalian genome : official journal of the International Mammalian Genome Society · 2010
    Article
  5. Wide genetic variation in the native pial collateral circulation is a major determinant of variation in severity of stroke.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Qila SaDepartment of Molecular Cardiology, Joseph J. Jacobs Center for Thrombosis and Vascular Biology, Cleveland, OH 44195, USA.
Erika Hart
Annie E Hill
Joseph H Nadeau
Jane L Hoover-Plow
Christ Hospital · USUniversity School · USCleveland Clinic Lerner College of Medicine · US

Funding

MOUSE GENETIC RESOURCES FOR MULTIGENIC DISEASE ANALYSIS: AIDSP40RR012305 · NCRR · CASE WESTERN RESERVE UNIVERSITY · PI BERGER, NATHAN A. · 1996 to 2011
$6.8M
THE CLASSICAL AND ALTERNATIVE PATHWAYS OF FIBRINOLYSISR01HL017964 · NHLBI · SCRIPPS RESEARCH INSTITUTE · PI PLOW, EDWARD FRANKLIN · 1985 to 2015
$5.6M
Regulation of Leukocyte Migration by PlasminogenR01HL078701 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI HOOVER-PLOW, JANE LEE · 2004 to 2013
$2.7M
SYSTEMATIC EVALUATION OF THE PLASMINOGEN SYSTEM IN MICER01HL065204 · NHLBI · CLEVELAND CLINIC FOUNDATION · PI HOOVER-PLOW, JANE LEE · 2000 to 2003
$1.2M
NCRR NIH HHS P40 RR012305NHLBI NIH HHS R01 HL017964NHLBI NIH HHS R01 HL065204NHLBI NIH HHS R01 HL078701
6 · The paper itself

Abstract

Susceptibility to thrombosis varies in human populations as well as many in inbred mouse strains. The objective of this study was to characterize the genetic control of thrombotic risk on three chromosomes. Previously, utilizing a tail-bleeding/rebleeding assay as a surrogate of hemostasis and thrombosis function, three mouse chromosome substitution strains (CSS) (B6-Chr5(A/J), Chr11(A/J), Chr17(A/J)) were identified (Hmtb1, Hmtb2, Hmtb3). The tail-bleeding/rebleeding assay is widely used and distinguishes mice with genetic defects in blood clot formation or dissolution. In the present study, quantitative trait locus (QTL) analysis revealed a significant locus for rebleeding (clot stability) time (time between cessation of initial bleeding and start of the second bleeding) on chromosome 5, suggestive loci for bleeding time (time between start of bleeding and cessation of bleeding) also on chromosomes 5, and two suggestive loci for clot stability on chromosome 17 and one on chromosome 11. The three CSS and the parent A/J had elevated clot stability time. There was no interaction of genes on chromosome 11 with genes on chromosome 5 or chromosome 17. On chromosome 17, twenty-three candidate genes were identified in synteny with previously identified loci for thrombotic risk on human chromosome 18. Thus, we have identified new QTLs and candidate genes not previously known to influence thrombotic risk.

Indexed as

AllelesAnimalsChromosomes, MammalianDNA Restriction EnzymesGenetic MarkersHemostasisMiceMice, Inbred C57BLMicrosatellite RepeatsPolymorphism, Restriction Fragment LengthQuantitative Trait LociThrombosisDNA Restriction EnzymesGenetic Markers

Identifiers

PMID18787898
PMCPMC3375051
OpenAlexW1980999164

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.