Evidence map›Paper›PMID 18787102›Full record

ArticleThe American journal of pathology2008

Nuclear factor-kappaB is a critical mediator of Ste20-like proline-/alanine-rich kinase regulation in intestinal inflammation.

Yutao Yan, Guillaume Dalmasso, Hang Thi Thu Nguyen, Tracy S Obertone, Laetitia Charrier-Hisamuddin, Shanthi V Sitaraman, Didier Merlin

Open access · bronzeAbstract read
In one paragraph

Article in The American journal of pathology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 47 citations in OpenAlex.

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  8. WNK1 in Malignant Behaviors: A Potential Target for Cancer?Frontiers in cell and developmental biology · 2022
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  13. WNK pathways in cancer signaling networks.Cell communication and signaling : CCS · 2018
    Review
  14. Paclitaxel Sensitivity of Ovarian Cancer Can be Enhanced by Knocking Down Pairs of Kinases that Regulate MAP4 Phosphorylation and Microtubule Stability.Clinical cancer research : an official journal of the American Association for Cancer Research · 2018
    Article
  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Yutao YanDepartment of Medicine, Division of Digestive Diseases, Emory University, Atlanta, GA 30322, USA.
Guillaume Dalmasso
Hang Thi Thu Nguyen
Tracy S Obertone
Laetitia Charrier-Hisamuddin
Shanthi V Sitaraman
Didier Merlin
Emory University · US

Funding

Emory Epithelial Pathobiology Research Development CenterR24DK064399 · NIDDK · EMORY UNIVERSITY · PI PARKOS, CHARLES A · 2003 to 2012
$5.3M
ROLE OF CD98 IN INTESTINAL PERMEABILITYR01DK071594 · NIDDK · GEORGIA STATE UNIVERSITY · PI MERLIN, DIDIER · 2006 to 2017
$3.3M
DIET/GROWTH FACTOR MECHANISMS OF GUT ADAPTATIONR01DK055850 · NIDDK · EMORY UNIVERSITY · PI ZIEGLER, THOMAS R · 2000 to 2004
$1.5M
hPepT1 in Intestinal InflammationR01DK061941 · NIDDK · EMORY UNIVERSITY · PI MERLIN, DIDIER · 2003 to 2008
$1.3M
NIDDK NIH HHS R01 DK055850NIDDK NIH HHS R01 DK061941NIDDK NIH HHS R01-DK-061941NIDDK NIH HHS R01 DK071594NIDDK NIH HHS R01-DK-071594NIDDK NIH HHS R01-DK55850NIDDK NIH HHS R24 DK064399NIDDK NIH HHS R24-DK-064399
6 · The paper itself

Abstract

Inflammatory bowel disease (IBD) is thought to result from commensal flora, aberrant cellular stress, and genetic factors. Here we show that the expression of colonic Ste20-like proline-/alanine-rich kinase (SPAK) that lacks a PAPA box and an F-alpha helix loop is increased in patients with IBD. The same effects were observed in a mouse model of dextran sodium sulfate-induced colitis and in Caco2-BBE cells treated with the pro-inflammatory cytokine tumor necrosis factor (TNF)-alpha. The 5'-flanking region of the SPAK gene contains two transcriptional start sites, three transcription factor Sp1-binding sites, and one transcription factor nuclear factor (NF)-kappaB-binding site, but no TATA elements. The NF-kappaB-binding site was essential for stimulated SPAK promoter activity by TNF-alpha, whereas the Sp1-binding sites were important for basal promoter activity. siRNA-induced knockdown of NF-kappaB, but not of Sp1, reduced TNF-alpha-induced SPAK expression. Nuclear run-on and mRNA decay assays demonstrated that TNF-alpha directly increased SPAK mRNA transcription without affecting SPAK mRNA stability. Furthermore, up-regulation of NF-kappaB expression and demethylation of the CpG islands induced by TNF-alpha also played roles in the up-regulation of SPAK expression. In conclusion, our data indicate that during inflammatory conditions, TNF-alpha is a key regulator of SPAK expression. The development of compounds that can either modulate or disrupt the activity of SPAK-mediated pathways is therefore important for the control and attenuation of downstream pathological responses, particularly in IBD.

Indexed as

AnimalsBinding SitesCaco-2 CellsCloning, MolecularColitisCpG IslandsDextran SulfateDNA MethylationEnzyme InductionFemaleHumansInflammationMaleMiceMice, Inbred C57BLNF-kappa BDextran SulfateNF-kappa BPAS domain kinasesProtein Serine-Threonine KinasesSp1 Transcription FactorTumor Necrosis Factor-alpha

Identifiers

PMID18787102
PMCPMC2543070
OpenAlexW2031318787

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.