Evidence map›Paper›PMID 18786576›Full record

ReviewBiochimica et biophysica acta2009

The yeast lysosome-like vacuole: endpoint and crossroads.

Sheena Claire Li, Patricia M Kane

Open access · greenAbstract readReview
In one paragraph

Review in Biochimica et biophysica acta, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 242 papers.

0numbers the graph read from it
0cells of the map it votes in
242citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

242 citing papers in PubMed, 449 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Organelle scaling over a 100-fold cell size range.bioRxiv : the preprint server for biology · 2026
    Article
  7. Article
  8. Article
  9. Fluorescent organelle markers inbioRxiv : the preprint server for biology · 2026
    Article
  10. Review
  11. Article
  12. PolyphasicFrontiers in nutrition · 2026
    Article
  13. The Vacuolar Protein 8 (Vac8) Homolog inJournal of fungi (Basel, Switzerland) · 2025
    Article
  14. Article
  15. YeastbioRxiv : the preprint server for biology · 2025
    Article
  16. Article
  17. Review
  18. Article
  19. Mangiferin Exerts Antifungal Activity againstJournal of microbiology and biotechnology · 2025
    Article
  20. Cell membrane asymmetries and cellular aging.The Biochemical journal · 2025
    Review

182 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Sheena Claire LiDepartment of Biochemistry and Molecular Biology, SUNY Upstate Medical University, 750 East Adams Street, Syracuse, NY 13210, USA.
Patricia M Kane
SUNY Upstate Medical University · US

Funding

SUBUNIT STRUCTURE/FUNCTION IN VACUOLAR H+ ATPASESR01GM050322 · NIGMS · UPSTATE MEDICAL UNIVERSITY · PI KANE, PATRICIA M · 1994 to 2015
$4.1M
NIGMS NIH HHS GM50322NIGMS NIH HHS R01 GM050322
6 · The paper itself

Abstract

Fungal vacuoles are acidic organelles with degradative and storage capabilities that have many similarities to mammalian lysosomes and plant vacuoles. In the past several years, well-developed genetic, genomic, biochemical and cell biological tools in S. cerevisiae have provided fresh insights into vacuolar protein sorting, organelle acidification, ion homeostasis, autophagy, and stress-related functions of the vacuole, and these insights have often found parallels in mammalian lysosomes. This review provides a broad overview of the defining features and functions of S. cerevisiae vacuoles and compares these features to mammalian lysosomes. Recent research challenges the traditional view of vacuoles and lysosomes as simply the terminal compartment of biosynthetic and endocytic pathways (i.e. the "garbage dump" of the cell), and suggests instead that these compartments are unexpectedly dynamic and highly regulated.

Indexed as

AcidsLysosomesProtein TransportSaccharomyces cerevisiaeStress, PhysiologicalVacuolesAcids

Identifiers

PMID18786576
PMCPMC2906225
OpenAlexW2141747730

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.