Evidence map›Paper›PMID 18783790›Full record

ArticleJournal of molecular biology2008

Crystal structure of metastasis-associated protein S100A4 in the active calcium-bound form.

Puja Pathuri, Lutz Vogeley, Hartmut Luecke

Abstract readComparative Study
In one paragraph

Article in Journal of molecular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 38 citations in OpenAlex.

  1. Review
  2. Article
  3. Solid-State NMR Study to Probe the Effects of Divalent Metal Ions (CaLangmuir : the ACS journal of surfaces and colloids · 2021
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  16. Solution structure and dynamics of S100A5 in the apo and Ca2+-bound states.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2009
    Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Puja PathuriDepartment of Molecular Biology and Biochemistry, University of California, Irvine, CA 92697, USA.
Lutz Vogeley
Hartmut Luecke
University of California, Irvine · US

Funding

Structure-Function Studies of Annexin I and IIR01GM056445 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI LUECKE, HARTMUT · 1997 to 2006
$1.4M
The mechanism of signal transduction in photoreceptorsR01GM067808 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI LUECKE, HARTMUT · 2003 to 2006
$1.0M
NIGMS NIH HHS R01 GM056445NIGMS NIH HHS R01 GM067808NIGMS NIH HHS R01-GM067808
6 · The paper itself

Abstract

S100A4 (metastasin) is a member of the S100 family of calcium-binding proteins that is directly involved in tumorigenesis. Until recently, the only structural information available was the solution NMR structure of the inactive calcium-free form of the protein. Here we report the crystal structure of human S100A4 in the active calcium-bound state at 2.03 A resolution that was solved by molecular replacement in the space group P6(5) with two molecules in the asymmetric unit from perfectly merohedrally twinned crystals. The Ca(2+)-bound S100A4 structure reveals a large conformational change in the three-dimensional structure of the dimeric S100A4 protein upon calcium binding. This calcium-dependent conformational change opens up a hydrophobic binding pocket that is capable of binding to target proteins such as annexin A2, the tumor-suppressor protein p53 and myosin IIA. The structure of the active form of S100A4 provides insight into its interactions with its binding partners and a better understanding of its role in metastasis.

Indexed as

Amino Acid SequenceAnnexin A2ApoproteinsCalciumCrystallography, X-RayDimerizationHumansModels, MolecularMolecular Sequence DataNeoplasmsProtein BindingProtein ConformationProtein Structure, QuaternaryS100 Calcium-Binding Protein A4S100 ProteinsSequence Homology, Amino AcidAnnexin A2ANXA2 protein, humanApoproteinsCalciumS100A4 protein, humanS100 Calcium-Binding Protein A4S100 Proteins

Identifiers

PMID18783790
PMCPMC2644285
OpenAlexW2122271393

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.