Evidence map›Paper›PMID 18780816›Full record

ArticleProtein science : a publication of the Protein Society2008

Thioredoxin as a fusion tag for carrier-driven crystallization.

Lorenzo Corsini, Michael Hothorn, Klaus Scheffzek, Michael Sattler, Gunter Stier

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Tagging Recombinant Proteins to Enhance Solubility and Aid Purification.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  3. Review
  4. Article
  5. The Effect of Recombinant Tags onPlants (Basel, Switzerland) · 2020
    Article
  6. Article
  7. T4 lysozyme-facilitated crystallization of the human molybdenum cofactor-dependent enzyme mARC.Acta crystallographica. Section F, Structural biology communications · 2018
    Article
  8. The macro domain as fusion tag for carrier-driven crystallization.Protein science : a publication of the Protein Society · 2017
    Article
  9. Interaction network of the ribosome assembly machinery from a eukaryotic thermophile.Protein science : a publication of the Protein Society · 2017
    Article
  10. Article
  11. Review
  12. Article
  13. A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.Structure (London, England : 1993) · 2015
    Article
  14. Article
  15. Article
  16. Review
  17. To fuse or not to fuse: what is your purpose?Protein science : a publication of the Protein Society · 2013
    Review
  18. Application of protein engineering to enhance crystallizability and improve crystal properties.Acta crystallographica. Section D, Biological crystallography · 2010
    Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Lorenzo CorsiniStructural and Computational Biology Unit, European Molecular Biology Laboratory, 69117 Heidelberg, Germany.
Michael Hothorn
Klaus Scheffzek
Michael Sattler
Gunter Stier

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Structural investigations are frequently hindered by difficulties in obtaining diffracting crystals of the target protein. Here, we report the crystallization and structure solution of the U2AF homology motif (UHM) domain of splicing factor Puf60 fused to Escherichia coli thioredoxin A. Both modules make extensive crystallographic contacts, contributing to a well-defined crystal lattice with clear electron density for both the thioredoxin and the Puf60-UHM module. We compare two short linker sequences between the two fusion domains, GSAM and GSPPM, for which only the GSAM-linked fusion protein yielded diffracting crystals. While specific interdomain contacts are not observed for both fusion proteins, NMR relaxation data in solution indicate reduced interdomain mobility between the Trx and Puf60-UHM modules. The GSPPM-linked fusion protein is significantly more flexible, albeit both linker sequences have the same number of degrees of torsional freedom. Our analysis provides a rationale for the crystallization of the GSAM-linked fusion protein and indicates that in this case, a four-residue linker between thioredoxin A and the fused target may represent the maximal length for crystallization purposes. Our data provide an experimental basis for the rational design of linker sequences in carrier-driven crystallization and identify thioredoxin A as a powerful fusion partner that can aid crystallization of difficult targets.

Indexed as

Amino Acid SequenceBase SequenceCloning, MolecularCrystallizationCrystallography, X-RayDimerizationModels, MolecularMolecular Sequence DataNuclear ProteinsRecombinant Fusion ProteinsThioredoxinsTranscription FactorsNuclear ProteinsRecombinant Fusion ProteinsThioredoxinsTranscription Factors

Identifiers

PMID18780816
PMCPMC2590909

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.