Evidence map›Paper›PMID 18779966›Full record

ArticlePlant cell reports2008

Functional analysis of the Arabidopsis thaliana poly(A) binding protein PAB5 gene promoter in Nicotiana tabacum.

Keming Luo, Wei Deng, Shan Xu, Yan Pei

Abstract read
PubMed Publisher
In one paragraph

Article in Plant cell reports, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.4field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Keming LuoKey Laboratory of Eco-environments of Three Gorges Reservoir Region, Ministry of Education, School of Life Sciences, Southwest University, 400715 Chongqing, China.
Wei Deng
Shan Xu
Yan Pei
Southwest University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Poly(A) binding (PAB) proteins play an important role in posttranscriptional regulation by stabilizing mRNA and initiating translation in eukaryotes. Previous studies have shown that the expression of PAB5 gene encoding one of the poly(A) binding proteins (PABPs) in Arabidopsis thaliana is restricted to pollen, ovule and early embryogenesis. To investigate the tissue-specific expression of the PAB5 promoter, a series of promoter deletions (from -1,804, -1,653, -1,334, -1,014, -715, -424 and -175 to +185) were fused to the uidA reporter gene (GUS) and transformed into tobacco plants (Nicotiana tabacum L.). The results showed that GUS expression driven by the full-length PAB5 promoter was detected in floral organs (pollen, ovule, anther, stigma) and immature seeds, but not in vegetative tissues (root, stem, leaf) and mature seeds. Deletion analysis of the PAB5 promoter region revealed that promoters longer than -1,334 had the similar GUS expression level in pollen, ovule and immature seeds, whereas further 5' deletions resulted in a considerable reduction in GUS activity. These results indicated that the region between -1,653 and -1,014 was necessary to direct the tissue-specific expression of PAB5 promoter during development.

Indexed as

Genes, PlantPromoter Regions, GeneticArabidopsisArabidopsis ProteinsBase SequenceDNA, PlantDNA PrimersGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenes, ReporterMolecular Sequence DataNicotianaPlants, Genetically ModifiedPoly(A)-Binding ProteinsRecombinant ProteinsSequence DeletionArabidopsis ProteinsDNA, PlantDNA Primerspab5 protein, ArabidopsisPoly(A)-Binding ProteinsRecombinant Proteins

Identifiers

PMID18779966
OpenAlexW2033546048

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.