Evidence map›Paper›PMID 18779316›Full record

ArticleMolecular and cellular biology2008

Intersection of RNA processing and the type II fatty acid synthesis pathway in yeast mitochondria.

Melissa S Schonauer, Alexander J Kastaniotis, J Kalervo Hiltunen, Carol L Dieckmann

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 53 citations in OpenAlex.

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  11. Structure of human Fe-S assembly subcomplex reveals unexpected cysteine desulfurase architecture and acyl-ACP-ISD11 interactions.Proceedings of the National Academy of Sciences of the United States of America · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Melissa S SchonauerDepartment of Biochemistry and Molecular Biophysics, University of Arizona, Tucson, AZ 85721-0106, USA.
Alexander J Kastaniotis
J Kalervo Hiltunen
Carol L Dieckmann
University of Arizona · USUniversity of Oulu · FI

Funding

STABILITY AND TRANSLATION OF CYTOCHROME B MRNA IN YEASTR01GM034893 · NIGMS · UNIVERSITY OF ARIZONA · PI DIECKMANN, CAROL LOUISE · 1985 to 2009
$2.1M
NIGMS NIH HHS GM34893NIGMS NIH HHS R01 GM034893PHS HHS T3208659
6 · The paper itself

Abstract

Distinct metabolic pathways can intersect in ways that allow hierarchical or reciprocal regulation. In a screen of respiration-deficient Saccharomyces cerevisiae gene deletion strains for defects in mitochondrial RNA processing, we found that lack of any enzyme in the mitochondrial fatty acid type II biosynthetic pathway (FAS II) led to inefficient 5' processing of mitochondrial precursor tRNAs by RNase P. In particular, the precursor containing both RNase P RNA (RPM1) and tRNA(Pro) accumulated dramatically. Subsequent Pet127-driven 5' processing of RPM1 was blocked. The FAS II pathway defects resulted in the loss of lipoic acid attachment to subunits of three key mitochondrial enzymes, which suggests that the octanoic acid produced by the pathway is the sole precursor for lipoic acid synthesis and attachment. The protein component of yeast mitochondrial RNase P, Rpm2, is not modified by lipoic acid in the wild-type strain, and it is imported in FAS II mutant strains. Thus, a product of the FAS II pathway is required for RNase P RNA maturation, which positively affects RNase P activity. In addition, a product is required for lipoic acid production, which is needed for the activity of pyruvate dehydrogenase, which feeds acetyl-coenzyme A into the FAS II pathway. These two positive feedback cycles may provide switch-like control of mitochondrial gene expression in response to the metabolic state of the cell.

Indexed as

RNA Processing, Post-TranscriptionalBlotting, NorthernFatty Acid Synthase, Type IIGene DeletionGene Expression Regulation, FungalGreen Fluorescent ProteinsHydro-LyasesLipoylationMitochondriaMitochondrial ProteinsModels, BiologicalProtein TransportRecombinant Fusion ProteinsRibonuclease PRNA, FungalRNA, MessengerFatty Acid Synthase, Type IIGreen Fluorescent ProteinsHtd2 protein, S cerevisiaeHydro-LyasesMitochondrial ProteinsPET127 protein, S cerevisiaeRecombinant Fusion ProteinsRibonuclease PRNA, FungalRNA, MessengerRNA PrecursorsRNA, TransferRPM2 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTrans-Activators

Identifiers

PMID18779316
PMCPMC2573234
OpenAlexW2057447603

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.