Evidence map›Paper›PMID 18776202›Full record

ArticlePlant & cell physiology2008

Various spatiotemporal expression profiles of anther-expressed genes in rice.

Tokunori Hobo, Keita Suwabe, Koichiro Aya, Go Suzuki, Kentaro Yano, Takeshi Ishimizu, Masahiro Fujita, Shunsuke Kikuchi, Kazuki Hamada, Masumi Miyano and 12 more

Abstract read
In one paragraph

Article in Plant & cell physiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed.

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  18. Bioinformatics resources for pollen.Plant reproduction · 2016
    Review
  19. Review
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Tokunori HoboBioscience and Biotechnology Center, Nagoya University, Furocho, Chikusa, Nagoya, 464-8601 Japan.
Keita Suwabe
Koichiro Aya
Go Suzuki
Kentaro Yano
Takeshi Ishimizu
Masahiro Fujita
Shunsuke Kikuchi
Kazuki Hamada
Masumi Miyano
Tomoaki Fujioka
Fumi Kaneko
Tomohiko Kazama
Yoko Mizuta
Hirokazu Takahashi
Katsuhiro Shiono
Mikio Nakazono
Nobuhiro Tsutsumi
Yoshiaki Nagamura
Nori Kurata
Masao Watanabe
Makoto Matsuoka

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The male gametophyte and tapetum play different roles during anther development although they are differentiated from the same cell lineage, the L2 layer. Until now, it has not been possible to delineate their transcriptomes due to technical difficulties in separating the two cell types. In the present study, we characterized the separated transcriptomes of the rice microspore/pollen and tapetum using laser microdissection (LM)-mediated microarray. Spatiotemporal expression patterns of 28,141 anther-expressed genes were classified into 20 clusters, which contained 3,468 (12.3%) anther-enriched genes. In some clusters, synchronous gene expression in the microspore and tapetum at the same developmental stage was observed as a novel characteristic of the anther transcriptome. Noteworthy expression patterns are discussed in connection with gene ontology (GO) categories and gene annotations, which are related to important biological events in anther development, such as pollen maturation, pollen germination, pollen tube elongation and pollen wall formation.

Indexed as

Gene Expression ProfilingGene Expression Regulation, PlantGenes, PlantCluster AnalysisGametogenesisGene Expression Regulation, DevelopmentalGenome, PlantLasersMicrodissectionOligonucleotide Array Sequence AnalysisOryzaPollenRNA, PlantRNA, Plant

Identifiers

PMID18776202
PMCPMC2566926

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.