Evidence map›Paper›PMID 18770013›Full record

ArticleJournal of bioenergetics and biomembranes2008

Nuclear and mitochondrial subunits from the white shrimp Litopenaeus vannamei F(0)F(1) ATP-synthase complex: cDNA sequence, molecular modeling, and mRNA quantification of atp9 and atp6.

Adriana Muhlia-Almazan, Oliviert Martinez-Cruz, Ma de los Angeles Navarrete del Toro, Fernando Garcia-Carreño, Rodrigo Arreola, Rogerio Sotelo-Mundo, Gloria Yepiz-Plascencia

Abstract read
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In one paragraph

Article in Journal of bioenergetics and biomembranes, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.1field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. The shrimp mitochondrial FoF1-ATPase inhibitory factor 1 (IF1).Journal of bioenergetics and biomembranes · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Adriana Muhlia-AlmazanMolecular Biology Lab, Centro de Investigación en Alimentación y Desarrollo (CIAD), A. C., Sonora, Mexico. amuhlia@ciad.mx
Oliviert Martinez-Cruz
Ma de los Angeles Navarrete del Toro
Fernando Garcia-Carreño
Rodrigo Arreola
Rogerio Sotelo-Mundo
Gloria Yepiz-Plascencia
Centro de Investigación en Alimentación y Desarrollo · MXCentro de Investigaciones Biológicas Margarita Salas · ESCenter for Research and Advanced Studies of the National Polytechnic Institute · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We studied for the first time the ATP-synthase complex from shrimp as a model to understand the basis of crustacean bioenergetics since they are exposed to endogenous processes as molting that demand high amount of energy. We analyzed the cDNA sequence of two subunits of the Fo sector from mitochondrial ATP-synthase in the white shrimp Litopenaeus vannamei. The nucleus encoded atp9 subunit presents a 773 bp sequence, containing a signal peptide sequence only observed in crustaceans, and the mitochondrial encoded atp6 subunit presents a sequence of 675 bp, and exhibits high identity with homologous sequences from invertebrate species. ATP9 and ATP6 protein structural models interaction suggest specific functional characteristics from both proteins in the mitochondrial enzyme. Differences in the steady-state mRNA levels of atp9 and atp6 from five different tissues correlate with tissue function. Moreover, significant changes in the mRNA levels of both subunits at different molt stages were detected. We discussed some insights about the enzyme structure and the regulation mechanisms from both ATP-synthase subunits related to the energy requirements of shrimp.

Indexed as

Models, ChemicalModels, MolecularProton-Translocating ATPasesAmino Acid SequenceAnimalsBase SequenceCell NucleusComputer SimulationGene Expression ProfilingMitochondriaMolecular Sequence DataPenaeidaeProtein ConformationProtein SubunitsRNA, MessengerProtein SubunitsProton-Translocating ATPasesRNA, Messenger

Identifiers

PMID18770013
OpenAlexW2151863447

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.