Evidence map›Paper›PMID 18768820›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

Identification of cardioviruses related to Theiler's murine encephalomyelitis virus in human infections.

Charles Y Chiu, Alexander L Greninger, Kimberly Kanada, Thomas Kwok, Kael F Fischer, Charles Runckel, Janice K Louie, Carol A Glaser, Shigeo Yagi, David P Schnurr and 4 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 95 papers.

0numbers the graph read from it
0cells of the map it votes in
95citing papers in PubMed
14.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

95 citing papers in PubMed, 166 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Biographical Feature: Charles Y. Chiu, M.D., Ph.D.Journal of clinical microbiology · 2024
    Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Infection and Propagation of Astrovirus VA1 in Cell Culture.Current protocols in microbiology · 2019
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Review
  18. Saffold virus, an emerging human cardiovirus.Reviews in medical virology · 2017
    Review
  19. Article
  20. Article

35 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 3 countries.

Charles Y ChiuDepartment of Biochemistry and Biophysics, University of California, 1700 4th Street, Box 2542, San Francisco, CA 94143, USA.
Alexander L Greninger
Kimberly Kanada
Thomas Kwok
Kael F Fischer
Charles Runckel
Janice K Louie
Carol A Glaser
Shigeo Yagi
David P Schnurr
Tom D Haggerty
Julie Parsonnet
Don Ganem
Joseph L DeRisi
Howard Hughes Medical Institute · USCalifornia Health and Human Services Agency · USInstitute of Molecular Biology and Biophysics · RUOffice of Infectious Diseases · US

Funding

EPIDEMIOLOGY OF HELICOBACTER PYLORI TRANSMISSIONR01AI042801 · NIAID · STANFORD UNIVERSITY · PI PARSONNET, JULIE · 1999 to 2010
$6.2M
Howard Hughes Medical InstituteNIAID NIH HHS R01 AI042801
6 · The paper itself

Abstract

Cardioviruses comprise a genus of picornaviruses that cause severe illnesses in rodents, but little is known about the prevalence, diversity, or spectrum of disease of such agents among humans. A single cardiovirus isolate, Saffold virus, was cultured in 1981 in stool from an infant with fever. Here, we describe the identification of a group of human cardioviruses that have been cloned directly from patient specimens, the first of which was detected using a pan-viral microarray in respiratory secretions from a child with influenza-like illness. Phylogenetic analysis of the nearly complete viral genome (7961 bp) revealed that this virus belongs to the Theiler's murine encephalomyelitis virus (TMEV) subgroup of cardioviruses and is most closely related to Saffold virus. Subsequent screening by RT-PCR of 719 additional respiratory specimens [637 (89%) from patients with acute respiratory illness] and 400 cerebrospinal fluid specimens from patients with neurological disease (aseptic meningitis, encephalitis, and multiple sclerosis) revealed no evidence of cardiovirus infection. However, screening of 751 stool specimens from 498 individuals in a gastroenteritis cohort resulted in the detection of 6 additional cardioviruses (1.2%). Although all 8 human cardioviruses (including Saffold virus) clustered together by phylogenetic analysis, significant sequence diversity was observed in the VP1 gene (66.9%-100% pairwise amino acid identities). These findings suggest that there exists a diverse group of novel human Theiler's murine encephalomyelitis virus-like cardioviruses that hitherto have gone largely undetected, are found primarily in the gastrointestinal tract, can be shed asymptomatically, and have potential links to enteric and extraintestinal disease.

Indexed as

Base SequenceCardiovirus InfectionsFecesGenome, ViralHumansPhylogenySequence Analysis, DNATheilovirusViral ProteinsViral Proteins

Identifiers

PMID18768820
PMCPMC2528868
OpenAlexW2069165825

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.