Evidence map›Paper›PMID 18768759›Full record

ArticleMolecular biology of the cell2008

The membrane dynamics of pexophagy are influenced by Sar1p in Pichia pastoris.

Laura A Schroder, Michael V Ortiz, William A Dunn

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 15 citations in OpenAlex.

  1. Pexophagy: the selective degradation of peroxisomes.International journal of cell biology · 2012
    Article
  2. Article
  3. Turnover of organelles by autophagy in yeast.Current opinion in cell biology · 2009
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Laura A SchroderDepartment of Anatomy and Cell Biology, University of Florida College of Medicine, Gainesville, FL 32610-0235, USA.
Michael V Ortiz
William A Dunn
Florida College · USUniversity of Florida · US

Funding

Characterization of the Molecular Events of AutophagyR01CA095552 · NCI · UNIVERSITY OF FLORIDA · PI DUNN, WILLIAM A · 2002 to 2006
$1.2M
NCI NIH HHS CA-95552NCI NIH HHS R01 CA095552
6 · The paper itself

Abstract

Several Sec proteins including a guanosine diphosphate/guanosine triphosphate exchange factor for Sar1p have been implicated in autophagy. In this study, we investigated the role of Sar1p in pexophagy by expressing dominant-negative mutant forms of Sar1p in Pichia pastoris. When expressing sar1pT34N or sar1pH79G, starvation-induced autophagy, glucose-induced micropexophagy, and ethanol-induced macropexophagy are dramatically suppressed. These Sar1p mutants did not affect the initiation or expansion of the sequestering membranes nor the trafficking of Atg11p and Atg9p to these membranes during micropexophagy. However, the lipidation of Atg8p and assembly of the micropexophagic membrane apparatus, which are essential to complete the incorporation of the peroxisomes into the degradative vacuole, were inhibited when either Sar1p mutant protein was expressed. During macropexophagy, the expression of sar1pT34N inhibited the formation of the pexophagosome, whereas sar1pH79G suppressed the delivery of the peroxisome from the pexophagosome to the vacuole. The pexophagosome contained Atg8p in wild-type cells, but in cells expressing sar1pH79G these organelles contain both Atg8p and endoplasmic reticulum components as visualized by DsRFP-HDEL. Our results demonstrate key roles for Sar1p in both micro- and macropexophagy.

Indexed as

AutophagyEndoplasmic ReticulumEthanolFungal ProteinsGenes, DominantGlucoseIntracellular MembranesLipid MetabolismMutant ProteinsMutationPeroxisomesPhagosomesPichiaProtein TransportRecombinant Fusion ProteinsEthanolFungal ProteinsGlucoseMutant ProteinsRecombinant Fusion Proteins

Identifiers

PMID18768759
PMCPMC2575157
OpenAlexW2155885583

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.