Evidence map›Paper›PMID 18768753›Full record

ArticleMolecular biology of the cell2008

The Atg8 conjugation system is indispensable for proper development of autophagic isolation membranes in mice.

Yu-shin Sou, Satoshi Waguri, Jun-ichi Iwata, Takashi Ueno, Tsutomu Fujimura, Taichi Hara, Naoki Sawada, Akane Yamada, Noboru Mizushima, Yasuo Uchiyama and 3 more

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 267 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
267citing papers in PubMed, 1 pooled it
18.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

267 citing papers in PubMed, 1 synthesis or guideline pooled it, 465 citations in OpenAlex.

  1. Pooled it
  2. Autophagy modulation in cancer.Nature reviews. Drug discovery · 2026
    Review
  3. Autophagy · 2026
    Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
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  18. ATG16L1 induces the formation of phagophore-like membrane cups.Nature structural & molecular biology · 2024
    Article
  19. Review
  20. Article

207 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Yu-shin SouLaboratory of Frontier Science, Tokyo Metropolitan Institute of Medical Science, Bunkyo-ku, Tokyo 113-8613, Japan.
Satoshi Waguri
Jun-ichi Iwata
Takashi Ueno
Tsutomu Fujimura
Taichi Hara
Naoki Sawada
Akane Yamada
Noboru Mizushima
Yasuo Uchiyama
Eiki Kominami
Keiji Tanaka
Masaaki Komatsu
Juntendo University · JPFukushima Medical University · JPTokyo Medical and Dental University · JPJapan Science and Technology Agency · JPTokyo Metropolitan Institute of Medical Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autophagy is an evolutionarily conserved bulk-protein degradation pathway in which isolation membranes engulf the cytoplasmic constituents, and the resulting autophagosomes transport them to lysosomes. Two ubiquitin-like conjugation systems, termed Atg12 and Atg8 systems, are essential for autophagosomal formation. In addition to the pathophysiological roles of autophagy in mammals, recent mouse genetic studies have shown that the Atg8 system is predominantly under the control of the Atg12 system. To clarify the roles of the Atg8 system in mammalian autophagosome formation, we generated mice deficient in Atg3 gene encoding specific E2 enzyme for Atg8. Atg3-deficient mice were born but died within 1 d after birth. Conjugate formation of mammalian Atg8 homologues was completely defective in the mutant mice. Intriguingly, Atg12-Atg5 conjugation was markedly decreased in Atg3-deficient mice, and its dissociation from isolation membranes was significantly delayed. Furthermore, loss of Atg3 was associated with defective process of autophagosome formation, including the elongation and complete closure of the isolation membranes, resulting in malformation of the autophagosomes. The results indicate the essential role of the Atg8 system in the proper development of autophagic isolation membranes in mice.

Indexed as

AutophagyAnimalsAutophagy-Related Protein 12Autophagy-Related Protein 5Cell MembraneFibroblastsHepatocytesLysosomesMiceMice, KnockoutMicrotubule-Associated ProteinsPhagosomesPhenotypeProteinsUbiquitin-Conjugating EnzymesUbiquitinsAtg12 protein, mouseAtg5 protein, mouseAutophagy-Related Protein 12Autophagy-Related Protein 5Gabarapl1 protein, mouseMicrotubule-Associated ProteinsProteinsUbiquitin-Conjugating EnzymesUbiquitins

Identifiers

PMID18768753
PMCPMC2575156
OpenAlexW2104558541

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.