Evidence map›Paper›PMID 18757916›Full record

ArticleGenetics2008

Requirement of Rad5 for DNA polymerase zeta-dependent translesion synthesis in Saccharomyces cerevisiae.

Vincent Pagès, Anne Bresson, Narottam Acharya, Satya Prakash, Robert P Fuchs, Louise Prakash

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 77 citations in OpenAlex.

  1. Review
  2. Article
  3. POLD3 as Controller of Replicative DNA Repair.International journal of molecular sciences · 2024
    Review
  4. Article
  5. Article
  6. Photoreactivation Activities of Rad5, Rad16A and Rad16B HelpJournal of fungi (Basel, Switzerland) · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Vincent PagèsDepartment of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, Texas 77555-1061, USA.
Anne Bresson
Narottam Acharya
Satya Prakash
Robert P Fuchs
Louise Prakash
The University of Texas Medical Branch at Galveston · USAix-Marseille Université · FRÉcole Supérieure de Biotechnologie de Strasbourg · FR

Funding

Translesion synthesis by yeast DNA polymerasesR01CA107650 · NCI · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI PRAKASH, LOUISE · 2004 to 2013
$3.9M
NCI NIH HHS CA107650NCI NIH HHS R01 CA107650
6 · The paper itself

Abstract

In yeast, Rad6-Rad18-dependent lesion bypass involves translesion synthesis (TLS) by DNA polymerases eta or zeta or Rad5-dependent postreplication repair (PRR) in which error-free replication through the DNA lesion occurs by template switching. Rad5 functions in PRR via its two distinct activities--a ubiquitin ligase that promotes Mms2-Ubc13-mediated K63-linked polyubiquitination of PCNA at its lysine 164 residue and a DNA helicase that is specialized for replication fork regression. Both these activities are important for Rad5's ability to function in PRR. Here we provide evidence for the requirement of Rad5 in TLS mediated by Polzeta. Using duplex plasmids carrying different site-specific DNA lesions--an abasic site, a cis-syn TT dimer, a (6-4) TT photoproduct, or a G-AAF adduct--we show that Rad5 is needed for Polzeta-dependent TLS. Rad5 action in this role is likely to be structural, since neither the inactivation of its ubiquitin ligase activity nor the inactivation of its helicase activity impairs its role in TLS.

Indexed as

Gene Expression Regulation, FungalAdenosine TriphosphatasesDimerizationDNA-Directed DNA PolymeraseDNA HelicasesDNA RepairGenes, FungalLightModels, BiologicalModels, GeneticNucleotidyltransferasesPlasmidsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsUbiquitinUbiquitin-Protein LigasesAdenosine TriphosphatasesDNA-Directed DNA PolymeraseDNA HelicasesDNA polymerase zetaNucleotidyltransferasesRAD5 protein, S cerevisiaeREV1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsUbiquitinUbiquitin-Protein LigasesY-Family DNA Polymerases

Identifiers

PMID18757916
PMCPMC2535723
OpenAlexW2135713533

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.