Evidence map›Paper›PMID 18757810›Full record

ArticleMicrobiology (Reading, England)2008

Threonine biosynthetic genes are essential in Cryptococcus neoformans.

Joanne M Kingsbury, John H McCusker

Open access · greenAbstract read
In one paragraph

Article in Microbiology (Reading, England), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
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  4. GC/EI/MS andMetabolites · 2023
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  5. Review
  6. Molecular Characterization ofFrontiers in microbiology · 2021
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Joanne M KingsburyDepartment of Molecular Genetics and Microbiology, Box 3020, Duke University Medical Center, Durham, NC 27710, USA.
John H McCuskerDepartment of Molecular Genetics and Microbiology, Box 3020, Duke University Medical Center, Durham, NC 27710, USA.
Duke University · US

Funding

S. Cerevisiae Emergence of an Opportunistic PathogenR01GM070541 · NIGMS · DUKE UNIVERSITY · PI MCCUSKER, JOHN H. · 2005 to 2009
$1.4M
Fungal-specific drug targets: static vs. cidal starvation & toxic intermediatesR21AI070247 · NIAID · DUKE UNIVERSITY · PI MCCUSKER, JOHN H. · 2007 to 2008
$425k
NIAID NIH HHS R21 AI070247NIGMS NIH HHS R01 GM070541
6 · The paper itself

Abstract

We identified and attempted to disrupt the Cryptococcus neoformans homoserine and/or threonine biosynthetic genes encoding aspartate kinase (HOM3), homoserine kinase (THR1) and threonine synthase (THR4); however, each gene proved recalcitrant to disruption. By replacing the endogenous promoters of HOM3 and THR1 with the copper-repressible CTR4-1 promoter, we showed that HOM3 and THR1 were essential for the growth of C. neoformans in rich media, when ammonium was the nitrogen source, or when threonine was supplied as an amino acid instead of a dipeptide. Moreover, the severity of the growth defect associated with HOM3 or THR1 repression increased with increasing incubation temperature. We believe this to be the first demonstration of threonine biosynthetic genes being essential in a fungus. The necessity of these genes for C. neoformans growth, particularly at physiologically relevant temperatures, makes threonine biosynthetic genes ideal anti-cryptococcal drug targets.

Indexed as

Genes, FungalAspartate KinaseCarbon-Oxygen LyasesCryptococcus neoformansDNA, FungalFungal ProteinsGene Expression Regulation, FungalGenes, EssentialHomoserineNitrogenPhenotypePhosphotransferases (Alcohol Group Acceptor)PlasmidsPromoter Regions, GeneticRNA, FungalTemperatureAspartate KinaseCarbon-Oxygen LyasesDNA, FungalFungal ProteinsHomoserinehomoserine kinaseNitrogenPhosphotransferases (Alcohol Group Acceptor)RNA, FungalThreoninethreonine synthase

Identifiers

PMID18757810
PMCPMC2674386
OpenAlexW2144353353

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.