Evidence map›Paper›PMID 18757734›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

A conserved salt bridge critical for GABA(A) receptor function and loop C dynamics.

Srinivasan P Venkatachalan, Cynthia Czajkowski

Erratum issuedAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed.

  1. A pore-facing glycan constrains GABACommunications biology · 2026
    Article
  2. βInternational journal of molecular sciences · 2025
    Article
  3. Article
  4. Article
  5. Physical and functional interaction sites in cytoplasmic domains of KCNQ1 and KCNE1 channel subunits.American journal of physiology. Heart and circulatory physiology · 2020
    Article
  6. Article
  7. An intersubunit electrostatic interaction in the GABAThe Journal of biological chemistry · 2018
    Article
  8. A triad of residues is functionally transferrable between 5-HTThe Journal of biological chemistry · 2018
    Article
  9. Article
  10. Article
  11. Loop G in the GABAThe Journal of physiology · 2017
    Article
  12. Article
  13. Article
  14. Article
  15. Article
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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

2 authors.

Srinivasan P VenkatachalanDepartment of Physiology, University of Wisconsin-Madison, 601 Science Drive, Madison, WI 53711, USA.
Cynthia Czajkowski

Funding

STRUCTURE OF THE GABA A RECEPTOR BINDING SITESR01NS034727 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI CZAJKOWSKI, CYNTHIA M · 1997 to 2016
$6.1M
NINDS NIH HHS R01 NS034727PHS HHS NINDS 34727
6 · The paper itself

Abstract

Chemical signaling in the brain involves rapid opening and closing of ligand gated ion channels (LGICs). LGICs are allosteric membrane proteins that transition between multiple conformational states (closed, open, and desensitized) in response to ligand binding. While structural models of cys-loop LGICs have been recently developed, our understanding of the protein movements underlying these conformational transitions is limited. Neurotransmitter binding is believed to initiate an inward capping movement of the loop C region of the ligand-binding site, which ultimately triggers channel gating. Here, we identify a critical intrasubunit salt bridge between conserved charged residues (betaE153, betaK196) in the GABA(A) receptor (GABA(A)R) that is involved in regulating loop C position. Charge reversals (E153K, K196E) increased the EC(50) for GABA and for the allosteric activators pentobarbital (PB) and propofol indicating that these residues are critical for channel activation, and charge swap (E153K-K196E) significantly rescued receptor function suggesting a functional electrostatic interaction. Mutant cycle analysis of alanine substitutions indicated that E153 and K196 are energetically coupled. By monitoring disulfide bond formation between cysteines substituted at these positions (E153C-K196C), we probed the mobility of loop C in resting and ligand-bound states. Disulfide bond formation was significantly reduced in the presence of GABA or PB suggesting that agonist activation of the GABA(A)R proceeds via restricting loop C mobility.

Indexed as

Amino Acid MotifsAnimalsDisulfidesFemaleHumansModels, MolecularMolecular Sequence DataMutationOocytesPatch-Clamp TechniquesProtein Structure, TertiaryRatsReceptors, GABA-ASequence AlignmentXenopus laevisDisulfidesReceptors, GABA-A

Identifiers

PMID18757734
PMCPMC2533236

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.