Evidence map›Paper›PMID 18757564›Full record

ArticleBiophysical journal2008

Measurement of instantaneous velocity vectors of organelle transport: mitochondrial transport and bioenergetics in hippocampal neurons.

Akos A Gerencser, David G Nicholls

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Chronic Energy Depletion due to Iron Deficiency Impairs Dendritic Mitochondrial Motility during Hippocampal Neuron Development.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2019
    Article
  6. Article
  7. Article
  8. Article
  9. Dynamics of Mitochondrial Transport in Axons.Frontiers in cellular neuroscience · 2016
    Article
  10. Article
  11. Article
  12. No consistent bioenergetic defects in presynaptic nerve terminals isolated from mouse models of Alzheimer's disease.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2012
    Article
  13. Article
  14. Mitochondrial dynamics: the intersection of form and function.Advances in experimental medicine and biology · 2012
    Review
  15. The parkinsonian mimetic, MPP+, specifically impairs mitochondrial transport in dopamine axons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2011
    Article
  16. Intrinsic bioenergetic properties and stress sensitivity of dopaminergic synaptosomes.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2011
    Article
  17. Article
  18. Organellar vs cellular control of mitochondrial dynamics.Seminars in cell & developmental biology · 2010
    Review
  19. Review
  20. Mitochondria in cardiomyocyte Ca2+ signaling.The international journal of biochemistry & cell biology · 2009
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Akos A GerencserBuck Institute for Age Research, Novato, California 94945, USA. agerencser@buckinstitute.org
David G Nicholls
Buck Institute for Research on Aging · USHungarian Academy of Sciences · HU

Funding

Mass spectrometry and imaging technologies in GerosciencePL1AG032118 · NIA · BUCK INSTITUTE FOR RESEARCH ON AGING · PI GIBSON, BRADFORD WAYNE · 2007 to 2011
$4.5M
NIA NIH HHS PL1 AG032118
6 · The paper itself

Abstract

Impaired transport of mitochondria, in dendrites and axons of neurons, and bioenergetic deficit are increasingly recognized to be of pathological importance in neurodegenerative diseases. To study the relationship between transport and bioenergetics, we have developed what to our knowledge is a novel technique to quantify organelle velocity in cultured cells. The aim was to combine measurement of motion and bioenergetic parameters while minimizing photodynamic oxidative artifacts evoked by fluorescence excitation. Velocity determination from sequential fluorescence images is not trivial, and here we describe an application of "optical flow", the flow of gray values in grayscale images, to this problem. Based on the principles of photon shot noise occurring in low light level fluorescence microscopy, we describe and validate here an optical flow-based, robust method to measure velocity vectors for organelles expressing fluorescent proteins. This method features instantaneous velocity determination from a pair of images by detecting motion of edges, with no assumptions about the separation or shapes of the objects in the image. Optical flow was used in combination with single mitochondrion assay of mitochondrial thiol redox status by mitochondrially targeted redox-sensitive green fluorescent protein and measurement of mitochondrial membrane potential by tetramethylrhodamine methyl ester. Mitochondrial populations of resting cultured hippocampal neurons were analyzed. It was found that mitochondria with more oxidized thiol redox status have lower membrane potentials and are smaller in size. These mitochondria are more motile than the average; however, mitochondrial motility is only slightly dependent on the observed bioenergetic parameters and is correlated the best to the size of the mitochondria.

Indexed as

Energy MetabolismAnimalsArtifactsAxonsCattleDendritesHippocampusMembrane PotentialsMitochondriaMitochondrial SizeNeuronsOxidation-ReductionRatsSensitivity and SpecificitySulfhydryl CompoundsTime FactorsSulfhydryl Compounds

Identifiers

PMID18757564
PMCPMC2527267
OpenAlexW2100553187

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.