Evidence map›Paper›PMID 18755696›Full record

ArticleThe Journal of antimicrobial chemotherapy2008

Vibrio cholerae O1 from Accra, Ghana carrying a class 2 integron and the SXT element.

Japheth A Opintan, Mercy J Newman, Owusu Agyemang Nsiah-Poodoh, Iruka N Okeke

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 54 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. In Silico Detection of Antimicrobial Resistance Integrons inAntibiotics (Basel, Switzerland) · 2021
    Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Antimicrobial resistance ofAfrican journal of laboratory medicine · 2018
    Review
  10. Vibrio Pathogens: A Public Health Concern in Rural Water Resources in Sub-Saharan Africa.International journal of environmental research and public health · 2017
    Review
  11. Identification of AtypicalFrontiers in microbiology · 2017
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Japheth A OpintanDepartment of Microbiology, University of Ghana Medical School, PO Box 4236, Accra, Ghana.
Mercy J Newman
Owusu Agyemang Nsiah-Poodoh
Iruka N Okeke
University of Ghana · GHHaverford College · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesVibrio cholerae O1 from a 2006 outbreak in Accra were commonly resistant to multiple antimicrobials and, in particular, to trimethoprim/sulfamethoxazole, drugs commonly used in the treatment of cholera. We sought to determine the genetic basis for trimethoprim/sulfamethoxazole resistance in outbreak isolates.

methodsTwenty-seven isolates from the outbreak were screened by PCR and sequencing for class 1 and 2 integrons and for the SXT element.

resultsTwenty-one of the 27 isolates examined, all from the Accra metropolitan area, carried both SXT, an integrated chromosomal element, and a class 2 integron bearing dfrA1, sat and aadA1 cassettes. All these isolates had identical random amplification of polymorphic DNA profiles and two of them also carried a class 1 integron.

conclusionsMost strains characterized carried multiple elements conferring resistance to trimethoprim. This suggests that trimethoprim/sulfamethoxazole should not be used empirically in cholera treatment.

Indexed as

Disease OutbreaksDrug Resistance, BacterialIntegronsAdultAnti-Bacterial AgentsBacterial ProteinsChildChild, PreschoolCholeraCluster AnalysisDNA, BacterialDNA FingerprintingFemaleGhanaHumansInterspersed Repetitive SequencesAnti-Bacterial AgentsBacterial ProteinsDNA, BacterialTrimethoprim, Sulfamethoxazole Drug Combination

Identifiers

PMID18755696
PMCPMC2566517
OpenAlexW2106452301

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.