Evidence map›Paper›PMID 18753677›Full record

ArticleJournal of lipid research2009

Direct quantitation of psychosine from alkaline-treated lipid extracts with a semi-synthetic internal standard.

Xuntian Jiang, Kui Yang, Xianlin Han

Open access · hybridAbstract read
In one paragraph

Article in Journal of lipid research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Multidimensional mass spectrometry-based shotgun lipidomics.Methods in molecular biology (Clifton, N.J.) · 2014
    Article
  7. Article
  8. Article
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  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Xuntian JiangDivision of Bioorganic Chemistry and Molecular Pharmacology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, MO 63110, USA.
Kui Yang
Xianlin Han
Washington University in St. Louis · US

Funding

Shotgun Lipidomics and Alterations in Sphingolipidomes in Alzheimer's DiseasesR01AG031675 · NIA · WASHINGTON UNIVERSITY · PI HAN, XIANLIN · 2007 to 2011
$2.8M
THE ROLE OF SULFATIDES IN ALZHEIMER'S DISEASER01AG023168 · NIA · WASHINGTON UNIVERSITY · PI HAN, XIANLIN · 2005 to 2008
$1.1M
NIA NIH HHS R01 AG023168NIA NIH HHS R01 AG031675NIA NIH HHS R01 AG-23168NIA NIH HHS R01 AG-31675
6 · The paper itself

Abstract

Psychosine is an important bioactive sphingolipid metabolite and plays an essential role in the pathogenesis of Krabbe's disease. Herein, we extended shotgun lipidomics for the characterization and quantitation of psychosine in alkaline-treated crude lipid extracts by using neutral loss scan of 180 amicro (i.e., galactose) in the positive-ion mode. Specifically, we semi-synthesized N,N-dimethyl psychosine and used it as an internal standard for quantitation of psychosine. After characterization of the fragmentation patterns of psychosine and the selected internal standard and optimization of the experimental conditions, we demonstrated that a broad linear dynamic range for the quantitation of psychosine and a limit of detection at a concentration of low fmol/microl were achieved using this approach. The developed method is generally simpler and more efficient than other previously reported methods. Multiple factors influencing quantitation of psychosine were extensively examined and/or discussed. The levels of psychosine in diabetic mouse nerve tissue samples were determined by the developed methodology. Collectively, the developed approach, as a new addition to the shotgun lipidomics technology, will be extremely useful for understanding the pathways/networks of sphingolipid metabolism and for exploring the important roles of psychosine in a variety of physiological and pathological conditions.

Indexed as

AnimalsBiochemistryBrainDiabetes Mellitus, ExperimentalIonsLipidsMass SpectrometryMiceMice, Inbred C57BLModels, ChemicalPsychosineReproducibility of ResultsSpectrometry, Mass, Electrospray IonizationSphingolipidsIonsLipidsPsychosineSphingolipids

Identifiers

PMID18753677
PMCPMC3837464
OpenAlexW2014088814

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.