Evidence map›Paper›PMID 18753620›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

In vivo imaging of pyrrole-imidazole polyamides with positron emission tomography.

Daniel A Harki, Nagichettiar Satyamurthy, David B Stout, Michael E Phelps, Peter B Dervan

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
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  6. Molecular Mechanisms and Therapeutics for the GAA·TTC Expansion Disease Friedreich Ataxia.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2019
    Review
  7. Translating HDAC inhibitors in Friedreich's ataxia.Expert opinion on orphan drugs · 2016
    Article
  8. Article
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  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Daniel A HarkiDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Nagichettiar Satyamurthy
David B Stout
Michael E Phelps
Peter B Dervan
University of California, Los Angeles · USCalifornia Institute of Technology · US

Funding

SEQUENCE SPECIFIC RECOGNITION OF DOUBLE HELICAL DNAR01GM027681 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI DERVAN, PETER B · 1985 to 2017
$4.5M
UCLA Imaging Resource for Mouse Cancer ModelsR24CA092865 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI PHELPS, MICHAEL E · 2001 to 2006
$4.3M
Methods for Quantitative Mouse PET StudiesR01EB001943 · NIBIB · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HUANG, SUNG-CHENG · 2004 to 2011
$2.7M
SEQUENCE SPECIFIC RECOGNITION OF DNAR37GM027681 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI DERVAN, PETER B · 1996 to 2005
$1.9M
NCI NIH HHS R24 CA092865NCI NIH HHS R24 CA 92865NIBIB NIH HHS R01 EB001943NIBIB NIH HHS R01-EB001943NIGMS NIH HHS GM27681NIGMS NIH HHS R01 GM027681NIGMS NIH HHS R37 GM027681
6 · The paper itself

Abstract

The biodistribution profiles in mice of two pyrrole-imidazole polyamides were determined by PET. Pyrrole-imidazole polyamides are a class of small molecules that can be programmed to bind a broad repertoire of DNA sequences, disrupt transcription factor-DNA interfaces, and modulate gene expression pathways in cell culture experiments. The (18)F-radiolabeled polyamides were prepared by oxime ligation between 4-[(18)F]-fluorobenzaldehyde and a hydroxylamine moiety at the polyamide C terminus. Small animal PET imaging of radiolabeled polyamides administered to mice revealed distinct differences in the biodistribution of a 5-ring beta-linked polyamide versus an 8-ring hairpin, which exhibited better overall bioavailability. In vivo imaging of pyrrole-imidazole polyamides by PET is a minimum first step toward the translation of polyamide-based gene regulation from cell culture to small animal studies.

Indexed as

Positron-Emission TomographyWhole Body ImagingAnimalsBinding SitesDeoxyribonuclease IDNADNA FootprintingFluorine RadioisotopesHydrogen-Ion ConcentrationImidazolesMaleMiceMice, Inbred C57BLNylonsOximesPyrrolesDeoxyribonuclease IDNAFluorine RadioisotopesimidazoleImidazolesNylonsOximesPyrroles

Identifiers

PMID18753620
PMCPMC2529060
OpenAlexW2104972790

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.