Evidence map›Paper›PMID 18753344›Full record

ArticleJournal of clinical microbiology2008

Proportions of Mycobacterium massiliense and Mycobacterium bolletii strains among Korean Mycobacterium chelonae-Mycobacterium abscessus group isolates.

Hee-Youn Kim, Yoonwon Kook, Yeo-Jun Yun, Chan Geun Park, Nam Yong Lee, Tae Sun Shim, Bum-Joon Kim, Yoon-Hoh Kook

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.

0numbers the graph read from it
0cells of the map it votes in
63citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

63 citing papers in PubMed, 128 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Rapid and Accurate Differentiation ofFrontiers in cellular and infection microbiology · 2022
    Article
  6. Clinical Characteristics and Antimicrobial Susceptibility ofThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. Identification of Mycobacterium abscessus species and subspecies using the Cas12a/sgRNA-based nucleic acid detection platform.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2020
    Article
  11. Article
  12. PCR amplification of theExperimental and therapeutic medicine · 2020
    Article
  13. Article
  14. Phagosome Escape of RoughFrontiers in immunology · 2019
    Article
  15. Observational
  16. Article
  17. Article
  18. Article
  19. Rapidly Growing Mycobacteria.Microbiology spectrum · 2017
    Review
  20. Article

3 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 4 countries.

Hee-Youn KimDepartment of Microbiology, Cancer Research Institute, SNUMRC, Seoul National University College of Medicine, and Seoul National University Hospital, Seoul 110-799, Republic of Korea.
Yoonwon Kook
Yeo-Jun Yun
Chan Geun Park
Nam Yong Lee
Tae Sun Shim
Bum-Joon Kim
Yoon-Hoh Kook
National University College · PRSeoul National University Hospital · KRHodges University · USNew Generation University College · ETSamsung Medical Center · KRUniversity of Ulsan · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Korean isolates of the Mycobacterium chelonae-Mycobacterium abscessus group, which had been isolated from two different hospitals in South Korea, were identified by PCR restriction analysis (PRA) and comparative sequence analysis of 16S rRNA genes, rpoB, and hsp65 to evaluate the proportion of four closely related species (M. chelonae, M. abscessus, M. massiliense, and M. bolletii). Of the 144 rapidly growing mycobacterial strains tested, 127 strains (88.2%) belonged to the M. chelonae-M. abscessus group. In this group, M. chelonae, M. abscessus, M. massiliense, and M. bolletii accounted for 0.8% (n = 1), 51.2% (n = 65), 46.5% (n = 59), and 1.6% (n = 2), respectively. Two isolates which showed discordant results, M. massiliense by rpoB sequence analysis and M. abscessus by hsp65 sequence analysis, were finally identified as M. massiliense based on the additional analysis of sodA and the 16S-23S internal transcribed spacer. M. abscessus group I isolates previously identified by hsp65 PRA were all found to be M. abscessus, whereas group II isolates were further identified as M. massiliense or M. bolletii by sequencing of rpoB and hsp65. Smooth, rough, or mixed colonies of both M. abscessus and M. massiliense isolates were observed. M. massiliense strains that were highly resistant to clarithromycin had a point mutation at the adenine at position 2058 (A(2058)) or 2059 (A(2059)) in the peptidyltransferase region of the 23S rRNA gene.

Indexed as

Antitubercular AgentsBacterial ProteinsChaperonin 60ChaperoninsClarithromycinDNA, BacterialDNA-Directed RNA PolymerasesDNA, RibosomalDNA, Ribosomal SpacerDrug Resistance, BacterialGenes, rRNAHumansKoreaMolecular Sequence DataMycobacteriumPhylogenyAntitubercular AgentsBacterial ProteinsChaperonin 60ChaperoninsClarithromycinDNA, BacterialDNA-Directed RNA PolymerasesDNA, RibosomalDNA, Ribosomal Spacerheat-shock protein 65, MycobacteriumRNA, BacterialRNA polymerase beta subunitRNA, Ribosomal, 16SRNA, Ribosomal, 23SSodA protein, BacteriaSuperoxide Dismutase

Identifiers

PMID18753344
PMCPMC2566064
OpenAlexW2129095203

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.