Evidence map›Paper›PMID 18726609›Full record

ArticleChromosoma2009

Higher-order genome organization in platypus and chicken sperm and repositioning of sex chromosomes during mammalian evolution.

Enkhjargal Tsend-Ayush, Natasha Dodge, Julia Mohr, Aaron Casey, Heinz Himmelbauer, Colin L Kremitzki, Kyriena Schatzkamer, Tina Graves, Wesley C Warren, Frank Grützner

Open access · hybridAbstract read
In one paragraph

Article in Chromosoma, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 25 citations in OpenAlex.

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  9. Identification of mediator complex 26 (Crsp7) gametologs on platypus X1 and Y5 sex chromosomes: a candidate testis-determining gene in monotremes?Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Enkhjargal Tsend-AyushSchool of Molecular & Biomedical Science, The University of Adelaide, Adelaide, SA, Australia.
Natasha Dodge
Julia Mohr
Aaron Casey
Heinz Himmelbauer
Colin L Kremitzki
Kyriena Schatzkamer
Tina Graves
Wesley C Warren
Frank Grützner
University of Adelaide · AUWashington University in St. Louis · USMax Planck Society · DE

Funding

Large Scale Genome SequencingU54HG003079 · NHGRI · WASHINGTON UNIVERSITY · PI DUTCHER, SUSAN K · 2004 to 2016
$445.7M
NHGRI NIH HHS U54 HG003079
6 · The paper itself

Abstract

In mammals, chromosomes occupy defined positions in sperm, whereas previous work in chicken showed random chromosome distribution. Monotremes (platypus and echidnas) are the most basal group of living mammals. They have elongated sperm like chicken and a complex sex chromosome system with homology to chicken sex chromosomes. We used platypus and chicken genomic clones to investigate genome organization in sperm. In chicken sperm, about half of the chromosomes investigated are organized non-randomly, whereas in platypus chromosome organization in sperm is almost entirely non-random. The use of genomic clones allowed us to determine chromosome orientation and chromatin compaction in sperm. We found that in both species chromosomes maintain orientation of chromosomes in sperm independent of random or non-random positioning along the sperm nucleus. The distance of loci correlated with the total length of sperm nuclei, suggesting that chromatin extension depends on sperm elongation. In platypus, most sex chromosomes cluster in the posterior region of the sperm nucleus, presumably the result of postmeiotic association of sex chromosomes. Chicken and platypus autosomes sharing homology with the human X chromosome located centrally in both species suggesting that this is the ancestral position. This suggests that in some therian mammals a more anterior position of the X chromosome has evolved independently.

Indexed as

Evolution, MolecularAnimalsCell LineChickensChromatinChromosomes, Artificial, BacterialFibroblastsGenomeIn Situ Hybridization, FluorescenceMaleMammalsPlatypusSex ChromosomesSpermatozoaChromatin

Identifiers

PMID18726609
PMCPMC3760518
OpenAlexW2119783891

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.