Evidence map›Paper›PMID 18723607›Full record

ArticleEukaryotic cell2008

TOR1 and TOR2 have distinct locations in live cells.

Thomas W Sturgill, Adiel Cohen, Melanie Diefenbacher, Mark Trautwein, Dietmar E Martin, Michael N Hall

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 157 citations in OpenAlex.

  1. Article
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  13. Ras, PI3K and mTORC2 - three's a crowd?Journal of cell science · 2020
    Review
  14. Review
  15. Article
  16. Analysis of the roles of phosphatidylinositol-4,5-Molecular biology of the cell · 2019
    Article
  17. Article
  18. Review
  19. Article
  20. Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Thomas W SturgillDepartment of Pharmacology, University of Virginia Health Sciences Center, Charlottesville, Virginia 22908, USA. Thomas_Sturgill@virginia.edu
Adiel Cohen
Melanie Diefenbacher
Mark Trautwein
Dietmar E Martin
Michael N Hall
University of Basel · CHUniversity of Virginia · US

Funding

PHAS REGULATION OF TRANSLATIONR01DK052753 · NIDDK · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI STURGILL, THOMAS W · 1996 to 2010
$3.4M
NIDDK NIH HHS DK052753NIDDK NIH HHS R01 DK052753
6 · The paper itself

Abstract

TOR is a structurally and functionally conserved Ser/Thr kinase found in two multiprotein complexes that regulate many cellular processes to control cell growth. Although extensively studied, the localization of TOR is still ambiguous, possibly because endogenous TOR in live cells has not been examined. Here, we examined the localization of green fluorescent protein (GFP) tagged, endogenous TOR1 and TOR2 in live S. cerevisiae cells. A DNA cassette encoding three copies of green fluorescent protein (3XGFP) was inserted in the TOR1 gene (at codon D330) or the TOR2 gene (at codon N321). The TORs were tagged internally because TOR1 or TOR2 tagged at the N or C terminus was not functional. The TOR1(D330-3XGFP) strain was not hypersensitive to rapamycin, was not cold sensitive, and was not resistant to manganese toxicity caused by the loss of Pmr1, all indications that TOR1-3XGFP was expressed and functional. TOR2-3XGFP was functional, as TOR2 is an essential gene and TOR2(N321-3XGFP) haploid cells were viable. Thus, TOR1 and TOR2 retain function after the insertion of 748 amino acids in a variable region of their noncatalytic domain. The localization patterns of TOR1-3XGFP and TOR2-3XGFP were documented by imaging of live cells. TOR1-3XGFP was diffusely cytoplasmic and concentrated near the vacuolar membrane. The TOR2-3XGFP signal was cytoplasmic but predominately in dots at the plasma membrane. Thus, TOR1 and TOR2 have distinct localization patterns, consistent with the regulation of cellular processes as part of two different complexes.

Indexed as

Amino Acid SequenceCell Cycle ProteinsCell MembraneCytoplasmGreen Fluorescent ProteinsMolecular Sequence DataPhosphatidylinositol 3-KinasesProtein TransportSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence AlignmentCell Cycle ProteinsGreen Fluorescent ProteinsPhosphatidylinositol 3-KinasesSaccharomyces cerevisiae ProteinsTOR1 protein, S cerevisiaeTOR2 protein, S cerevisiae

Identifiers

PMID18723607
PMCPMC2568074
OpenAlexW2168320506

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.