Evidence map›Paper›PMID 18723509›Full record

ArticleThe Journal of biological chemistry2008

The organization of LH2 complexes in membranes from Rhodobacter sphaeroides.

John D Olsen, Jaimey D Tucker, John A Timney, Pu Qian, Cvetelin Vassilev, C Neil Hunter

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Elucidating interprotein energy transfer dynamics within the antenna network from purple bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2023
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  6. Cryo-EM Structure of theBiochemistry · 2021
    Article
  7. Article
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  12. Membrane remodelling in bacteria.Journal of structural biology · 2016
    Review
  13. Article
  14. Article
  15. Article
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  17. Article
  18. Article
  19. Förster energy transfer theory as reflected in the structures of photosynthetic light-harvesting systems.Chemphyschem : a European journal of chemical physics and physical chemistry · 2011
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

John D OlsenDepartment of Molecular Biology, The University of Sheffield, Sheffield S10 2TN, UK. j.olsen@sheffield.ac.uk
Jaimey D Tucker
John A Timney
Pu Qian
Cvetelin Vassilev
C Neil Hunter
University of Sheffield · GB

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

The mapping of the photosynthetic membrane of Rhodobacter sphaeroides by atomic force microscopy (AFM) revealed a unique organization of arrays of dimeric reaction center-light harvesting I-PufX (RC-LH1-PufX) core complexes surrounded and interconnected by light-harvesting LH2 complexes (Bahatyrova, S., Frese, R. N., Siebert, C. A., Olsen, J. D., van der Werf, K. O., van Grondelle, R., Niederman, R. A., Bullough, P. A., Otto, C., and Hunter, C. N. (2004) Nature 430, 1058-1062). However, membrane regions consisting solely of LH2 complexes were under-represented in these images because these small, highly curved areas of membrane rendered them difficult to image even using gentle tapping mode AFM and impossible with contact mode AFM. We report AFM imaging of membranes prepared from a mutant of R. sphaeroides, DPF2G, that synthesizes only the LH2 complexes, which assembles spherical intracytoplasmic membrane vesicles of approximately 53 nm diameter in vivo. By opening these vesicles and adsorbing them onto mica to form small, < or =120 nm, largely flat sheets we have been able to visualize the organization of these LH2-only membranes for the first time. The transition from highly curved vesicle to the planar sheet is accompanied by a change in the packing of the LH2 complexes such that approximately half of the complexes are raised off the mica surface by approximately 1 nm relative to the rest. This vertical displacement produces a very regular corrugated appearance of the planar membrane sheets. Analysis of the topographs was used to measure the distances and angles between the complexes. These data are used to model the organization of LH2 complexes in the original, curved membrane. The implications of this architecture for the light harvesting function and diffusion of quinones in native membranes of R. sphaeroides are discussed.

Indexed as

Microscopy, Atomic ForceModels, MolecularBacterial ProteinsCell MembraneLight-Harvesting Protein ComplexesMutationRhodobacter sphaeroidesBacterial ProteinsLight-Harvesting Protein ComplexesPufX protein, Rhodobacter

Identifiers

PMID18723509
PMCPMC2662159
OpenAlexW2086448920

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.