Evidence map›Paper›PMID 18722184›Full record

ArticleMolecular cell2008

Arabidopsis COP1/SPA1 complex and FHY1/FHY3 associate with distinct phosphorylated forms of phytochrome A in balancing light signaling.

Yusuke Saijo, Danmeng Zhu, Jigang Li, Vicente Rubio, Zhenzhen Zhou, Yunping Shen, Ute Hoecker, Haiyang Wang, Xing Wang Deng

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
12.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 124 citations in OpenAlex.

  1. Article
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  6. Functional dissection of phytochrome A in plants.Frontiers in plant science · 2024
    Review
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  14. The phosphatase/kinase balance affects phytochrome A and its native pools, phyA' and phyA″, in etiolated maize roots: evidence from the induction of phyA' destruction by a protein phosphatase inhibitor sodium fluoride.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2021
    Article
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9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Yusuke SaijoDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06520, USA.
Danmeng ZhuDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06520, USA; Peking-Yale Joint Center of Plant Molecular Genetics and Agrobiotechnology, College of Life Sciences, Peking University, Beijing 100871, People's Republic of China.
Jigang LiDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06520, USA.
Vicente RubioDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06520, USA.
Zhenzhen ZhouDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06520, USA.
Yunping ShenDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06520, USA; Peking-Yale Joint Center of Plant Molecular Genetics and Agrobiotechnology, College of Life Sciences, Peking University, Beijing 100871, People's Republic of China.
Ute HoeckerInstitute of Botany, University of Cologne, D-50931 Cologne, Germany.
Haiyang WangDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06520, USA.
Xing Wang DengDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06520, USA. Electronic address: xingwang.deng@yale.edu.
Yale University · USPeking University · CNUniversity of Cologne · DE

Funding

Analysis of a Light-Regulated Development SwitchR37GM047850 · NIGMS · YALE UNIVERSITY · PI DENG, XING WANG · 2004 to 2013
$5.7M
LIGHT SIGNAL TRANDUCTION IN ARABIDOPSISR01GM047850 · NIGMS · YALE UNIVERSITY · PI WEI, NING · 1996 to 2018
$4.1M
LIGHT SIGNAL TRANSDUCTION IN ARABIDOPSISR29GM047850 · NIGMS · YALE UNIVERSITY · PI DENG, XING WANG · 1992 to 1995
–
NIGMS NIH HHS GM47850NIGMS NIH HHS R01 GM047850NIGMS NIH HHS R37 GM047850
6 · The paper itself

Abstract

Fine tuning of light signaling is crucial to plant development. Following light-triggered nuclear translocation, the photoreceptor phytochrome A (phyA) regulates gene expression under continuous far-red light and is rapidly destabilized upon red light irradiation by E3 ubiquitin ligases, including COP1. Here we provide evidence that the light signaling repressors SPA proteins contribute to COP1-mediated phyA degradation and that a COP1/SPA1 protein complex is tightly associated with phyA ubiquitination activity. Furthermore, a phosphorylated phyA form accumulates in the nucleus and preferentially associates with the COP1/SPA1 complex. In contrast, underphosphorylated phyA predominantly associates with the phyA-signaling intermediates FHY3 and FHY1. However, COP1 associates with underphosphorylated phyA in the absence of FHY3 or FHY1, suggesting that phyA associations with FHY3 and FHY1 protect underphosphorylated phyA from being recognized by the COP1/SPA complex. We propose that light-induced phyA phosphorylation acts as a switch controlling differential interactions of the photoreceptor with signal propagation or attenuation machineries.

Indexed as

LightArabidopsisArabidopsis ProteinsCell Cycle ProteinsPhosphorylationPhytochromePhytochrome AProtein BindingSignal TransductionUbiquitinationUbiquitin-Protein LigasesArabidopsis ProteinsAT2G32950 protein, ArabidopsisCell Cycle ProteinsFHY1 protein, ArabidopsisFHY3 protein, ArabidopsisPhytochromePhytochrome ASPA1 protein, ArabidopsisUbiquitin-Protein Ligases

Identifiers

PMID18722184
PMCPMC2597559
OpenAlexW2133840666

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.