Evidence map›Paper›PMID 18718911›Full record

ArticleThe Journal of biological chemistry2008

Epigenetic regulation of HYAL-1 hyaluronidase expression. identification of HYAL-1 promoter.

Vinata B Lokeshwar, Pablo Gomez, Mario Kramer, Judith Knapp, Melissa A McCornack, Luis E Lopez, Nevis Fregien, Neetika Dhir, Steve Scherer, David J Klumpp and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 39 citations in OpenAlex.

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  17. Is EGR1 a potential target for prostate cancer therapy?Future oncology (London, England) · 2009
    Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Vinata B LokeshwarDepartment of Urology, University of Miami Miller School of Medicine, Miami, Florida 33101, USA. vlokeshw@med.miami.edu
Pablo Gomez
Mario Kramer
Judith Knapp
Melissa A McCornack
Luis E Lopez
Nevis Fregien
Neetika Dhir
Steve Scherer
David J Klumpp
Murugesan Manoharan
Mark S Soloway
Bal L Lokeshwar
Northwestern University · USUniversity of Miami · USPromega (United States) · US

Funding

Glycosaminoglycan-based inhibitors for treatment of prostate cancerR01CA123063 · NCI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LOKESHWAR, VINATA B · 2007 to 2010
$1.0M
NCI NIH HHS R01 CA 123063-01PHS HHS R01 072821-09
6 · The paper itself

Abstract

HYAL-1 (hyaluronoglucosaminidase-1) belongs to the hyaluronidase family of enzymes that degrade hyaluronic acid. HYAL-1 is a marker for cancer diagnosis and a molecular determinant of tumor growth, invasion, and angiogenesis. The regulation of HYAL-1 expression is unknown. Real time reverse transcription-PCR using 11 bladder and prostate cancer cells and 69 bladder tissues showed that HYAL-1 mRNA levels are elevated 10-30-fold in cells/tissues that express high hyaluronidase activity. Although multiple transcription start sites (TSS) for HYAL-1 mRNA were detected in various tissues, the major TSS in many tissues, including bladder and prostate, was at nucleotide 27274 in the cosmid clone LUCA13 (AC002455). By analyzing the 1532 base sequence 5' to this TSS, using cloning and luciferase reporter assays, we identified a TACAAA sequence at position -31 and the minimal promoter region between nucleotides -93 and -38. Mutational analysis identified that nucleotides -73 to -50 (which include overlapping binding consensus sites for SP1, Egr-1, and AP-2), bases C(-71) and C(-59), and an NFkappaB-binding site (at position -15) are necessary for promoter activity. The chromatin immunoprecipitation assay identified that Egr-1, AP-2, and NFkappaB bind to the promoter in HYAL-1-expressing cells, whereas SP1 binds to the promoter in non-HYAL-1-expressing cells. 5-Aza-2'-deoxycytidine treatment, bisulfite DNA sequencing, and methylation-specific PCR revealed that HYAL-1 expression is regulated by methylation at C(-71) and C(-59); both Cs are part of the SP1/Egr-1-binding sites. Thus, HYAL-1 expression is epigenetically regulated by the binding of different transcription factors to the methylated and unmethylated HYAL-1 promoter.

Indexed as

Epigenesis, GeneticPromoter Regions, GeneticBinding SitesCell Line, TumorCloning, MolecularDNADNA PrimersHumansHyaluronoglucosaminidaseLuciferasesModels, BiologicalNF-kappa BRNA, MessengerTissue DistributionDNADNA PrimersHyaluronoglucosaminidaseLuciferasesNF-kappa BRNA, Messenger

Identifiers

PMID18718911
PMCPMC2570869
OpenAlexW2049170668

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.