Evidence map›Paper›PMID 18718539›Full record

ArticleProtein expression and purification2008

High-yield expression in E. coli and refolding of the bZIP domain of activating transcription factor 5.

Natalie A Ciaccio, Matthew L Moreno, Rachel L Bauer, Jennifer S Laurence

Open access · greenAbstract read
In one paragraph

Article in Protein expression and purification, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Self-assembly of the bZIP transcription factor ΔFosB.Current research in structural biology · 2020
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Natalie A CiaccioDepartment of Pharmaceutical Chemistry, The University of Kansas, Lawrence, KS 66047, USA.
Matthew L Moreno
Rachel L Bauer
Jennifer S Laurence
University of Kansas · US

Funding

TRAFFICKING OF THE PLASMA MEMBRANE CA2+-ATPASE TO RAFTSP20RR017708 · NCRR · UNIVERSITY OF KANSAS LAWRENCE · PI FISCHER, CHRISTOPHER JAMES · 2002 to 2011
$20.1M
MBRS IMSD PROGRAM AT THE UNIVERSITY OF KANSASR25GM062232 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI CARTWRIGHT, PAULYN, HANSON, PAUL R. · 2001 to 2018
$6.9M
NCRR NIH HHS P20 RR017708NCRR NIH HHS P20 RR-17708NIGMS NIH HHS R25 GM062232NIGMS NIH HHS R25 GM62232
6 · The paper itself

Abstract

Activating transcription factor 5 (ATF5) recently has been demonstrated to play a critical role in promoting the survival of human glioblastoma cells. Interference with the function of ATF5 in an in vivo rat model caused glioma cell death in primary tumors but did not affect the status of normal cells surrounding the tumor, suggesting ATF5 may prove an ideal target for anti-cancer therapy. In order to examine ATF5 as a pharmaceutical target, the protein must be produced and purified to sufficient quantity to begin analyses. Here, a procedure for expressing and refolding the bZIP domain of ATF5 in sufficient yield and final concentration to permit assay development and structural characterization of this target using solution NMR is reported. Two-dimensional NMR and circular dichroism analyses indicate the protein exists in the partially alpha-helical, monomeric x-form conformation with only a small fraction of ATF5 participating in formation of higher-order structure, presumably coiled-coil homodimerization. Despite the persistence of monomers in solution even at high concentration, an electrophoretic mobility shift assay showed that ATF5 is able to bind to the cAMP response element (CRE) DNA motif. Polyacrylamide gel electrophoresis and mass spectrometry were used to confirm that ATF5 can participate in homodimer formation and that this dimerization is mediated by disulfide bond formation.

Indexed as

Leucine ZippersProtein FoldingActivating Transcription FactorsCircular DichroismElectrophoresis, Polyacrylamide GelEscherichia coliGlutathione TransferaseMagnetic Resonance SpectroscopyMass SpectrometryProtein BindingProtein Structure, TertiaryRecombinant Fusion ProteinsResponse ElementsActivating Transcription FactorsGlutathione TransferaseRecombinant Fusion Proteins

Identifiers

PMID18718539
PMCPMC2599749
OpenAlexW2097887809

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.