Evidence map›Paper›PMID 18714992›Full record

ArticleJournal of the American Chemical Society2008

cis-Delta(2,3)-double bond of phoslactomycins is generated by a post-PKS tailoring enzyme.

Nadaraj Palaniappan, Mamoun M Alhamadsheh, Kevin A Reynolds

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Polyketide stereocontrol: a study in chemical biology.Beilstein journal of organic chemistry · 2017
    Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Dissecting complex polyketide biosynthesis.Computational and structural biotechnology journal · 2012
    Review
  13. Review
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Nadaraj PalaniappanDepartment of Chemistry, Portland State University, Portland, OR 97297, USA.
Mamoun M Alhamadsheh
Kevin A Reynolds

Funding

Phoslactomycins: Biosynthesis & ActivityR01AI051629 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI REYNOLDS, KEVIN A · 2002 to 2014
$3.0M
NIAID NIH HHS R01 AI051629PHS HHS A151629
6 · The paper itself

Abstract

The antifungal phoslactomycins (PLM A-F), produced by Streptomyces sp. HK803, are structurally unusual in that three of their four double bonds are in the cis form (Delta12,13, Delta14,15, Delta2,3). The PLM polyketide synthase (PKS) has the predicted dehydratase catalytic domain in modules 1, 2, and 5 required for establishing two of these cis double bonds (Delta12,13, Delta14,15), as well as the only trans Delta6,7 double bond. By contrast, the formation of the cis Delta2,3 in the unsaturated lactone moiety of PLMs has presented an enigma because the predicted dehydratase domain in module 7 is absent. Herein, we have demonstrated that the plmT2 gene product, with no homology to PKS dehydratase domains, is required for efficient formation of the cis Delta2,3 alkene. A series of new PLM products in which the C3 hydroxyl group is retained are made in plmT2 deletion mutants. In all of these cases, however, the hydroxyl group is esterified with malonic acid. These malonylated PLM products are converted to the corresponding cis Delta2,3 PLM products and acetic acid by a facile base-catalyzed decarboxylative elimination reaction. Complete or partial restoration of natural PLM production in a plmT2 deletion mutant can be accomplished by plasmid based expression of plmT2 or fos ORF4 (a homologous gene from the fostriecin biosynthetic gene cluster), respectively. The data indicate that dehydratase-independent pathways also function in establishment of unsaturated 6-membered lactone moieties in other PKS pathways and provide the first biosynthetic insights into the possible routes by which unusual malonylated polyketide products are generated.

Indexed as

AlkenesHydro-LyasesLactonesMultigene FamilyOpen Reading FramesOrganophosphorus CompoundsPolyenesPolyketide SynthasesProtein Structure, TertiaryPyronesStreptomycesAlkenesfostriecinHydro-LyasesLactonesOrganophosphorus CompoundsPolyenesPolyketide SynthasesPyrones

Identifiers

PMID18714992
PMCPMC2644895

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.